Shigella dysenteriae 1617 (serotype 1): Asd1617_00427
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Entry
Asd1617_00427 CDS
T02933
Name
(GenBank) Exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdz03400
]
Asd1617_00427
DNA repair and recombination proteins [BR:
sdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Asd1617_00427
Archaeal homologous recombinant proteins
Asd1617_00427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
cobW
SMC_N
AAA_15
nSTAND3
NTPase_1
AAA_22
RsgA_GTPase
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AHA63254
UniProt:
E2XC29
LinkDB
All DBs
Position
324488..327625
Genome browser
AA seq
1045 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLKASLQVLTDEEKLLLTAQQ
QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSAALAHTRRQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTLAVITLTLTADEVASALAQHAE
QRPLRQRLVALHGQIVPQQKRLAQLMVTIQNVTLEQTQRNAALNEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQCAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQARLLTLEKEVK
KLGEEGAALRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQL
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
DEEESWLATRQQEAQSWQHHQNELTTLQNRIQQLTPILETLPQSDELPHCEETVVLENWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDGQQAFLAALVDEQTLT
QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPGGLALTVTVEQIKQELAQTHQKLRE
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALSDLVSHKTRIDSLFLDEGFGTLNSETLDTALDALDALNASGKTIGVISHVEAMKER
IPVQIKVKKINGLGYSKLESAFAVK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgcaattaccggcccaaccggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaactccgcgt
ctctctaacgtttcacaatcgcaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaggtggagtttgaagtgaaaggtgaagcgtatcgcgcgttctggagccagaatcgg
gcgcgtaaccaacccgacggtaatttgcaggtgccacgcgtagagctggcgcgctgcgcc
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacagcgacgttaacc
gggctggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcggaattgctcgaggagttaaccggcactgaa
atctacgggcaaatctcggcgatggtttttgagcagcacaaatcggcccgcactgagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccggaacaagtgcaatcg
ctgaaagcgagtttgcaggtacttactgacgaagaaaaactgttacttaccgcgcagcag
caagaacaacaatcactaaactggttaacgcgtctggacgaattgcagcaagaagccagc
cgccgtcagcaggccttgcaacaggcgttagccgaagaagaaaaagcgcaacctcaactg
gcggcgcttagtctggcacaaccggcacgaaatcttcgtccacactgggaacgcatcgca
gaacacagcgcggcgctggcgcatactcgccggcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgcgcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatacctggttacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgtgag
catctgcggcaatggcagcaacagttaacccatgctgagcaaaaacttaatacgcttgcg
gtgatcacgttgacgttaaccgccgatgaagttgctagcgccctggcgcaacatgccgag
caacgcccactgcgtcagcgcctggtcgcgctgcatgggcagattgttccccaacaaaaa
cgtctggcgcagttaatggtcactatccagaatgtcactctggaacagacgcaacgtaat
gccgcacttaacgaaatgcgccagcgttataaagaaaagacgcagcaacttgccgatgtg
aaaaccatttgcgagcaggaagcgcgcatcaaaacgctggaagcccagtgcgcgcagtta
caggcgggtcagccttgtccactttgtggttccaccagccatccagcggtcgaggcgtat
caggcgctggaaccgggcgttaatcaggcccggctattaacgctggaaaaagaagtgaaa
aagctcggcgaagaaggtgcggcgctgcgcgggcaactggatgcattaacgaagcagctt
cagcgcgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccttgcagccacaggacgatattcaactg
tggctagatgcacaagatgagcacgaacgccagctgcggttactcagccaacgacatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcagctcttaacggcattggcgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacacgtcaacaagaagcgcagagctggcagcatcac
cagaacgaattaactacgctgcaaaaccgtattcagcagctgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcactgcgaagaaactgtggtattggaaaactggcgg
caggtacatgaacaatgtctcgcattacacagccagcagcagacgttacagcaacaggac
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcc
agcgtctttgacggtcagcaggcgttccttgcggcgctagtggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
actcagacagcagaaacgctggcacagcatcagcaacaccgacctggcgggttggctctc
actgtgacggtggagcagattaagcaagagttagcgcaaactcaccaaaagttgcgtgaa
aacaccacgagtcaaggcgagattcgccagcagctgaagcaggatgcagataaccgtcag
caacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgggga
tatctgaattcgctaataggttccaaagagggcgataaattccgcaagtttgcccagggg
ctgacgctggataatttagtccatctcgctaatcagcaacttacccgactgcacgggcgc
tatctgttacagcgcaaagccagcgaggcgctggaagtcgaggttgttgatacctggcag
gcagatgcggtacgtgacacccgtaccctttctggcggcgaaagtttcctcgtcagtctg
gcgctggcgctttcggatctggtcagccataaaacacgtattgactcgctgttccttgat
gaaggttttggcacgctgaatagcgaaacgctggataccgcccttgatgcgctggatgcc
ctgaacgccagtggcaaaaccatcggtgtgattagccacgttgaagcgatgaaagagcgt
attccggtgcagatcaaagtgaaaaagatcaacggcctgggctacagcaaactggaaagt
gcgtttgcagtgaaataa
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