Salmonella enterica subsp. enterica serovar Typhimurium ST4/74: STM474_4124
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Entry
STM474_4124 CDS
T01760
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
seb
Salmonella enterica subsp. enterica serovar Typhimurium ST4/74
Pathway
seb00300
Lysine biosynthesis
seb00470
D-Amino acid metabolism
seb01100
Metabolic pathways
seb01110
Biosynthesis of secondary metabolites
seb01120
Microbial metabolism in diverse environments
seb01230
Biosynthesis of amino acids
Module
seb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
seb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STM474_4124 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STM474_4124 (dapF)
Enzymes [BR:
seb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STM474_4124 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ADX19724
UniProt:
E8XJD5
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All DBs
Position
4173805..4174632
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AA seq
275 aa
AA seq
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MMQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFH
YRIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMG
EPNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVL
ESHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVR
VELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggta
acgcagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacctgggc
gtagggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcat
taccgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgt
ttcgcgcgatttgttcgcctgaaagggctaaccaataaacgcgacattcgggtcagtacc
gcgaatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaatatgggg
gaaccaaactttgaacccgcgcaggtgccttttcgcgccaacaaagcggaaaagacgtat
attatgcgagcggcggaacagaccatactgtgcggcgtggtttcaatgggcaatccgcac
tgtgtcattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctg
gaaagccatgagcgttttccggaacgcgccaacattggttttatgcaggttgtaagacgt
gagcatatccggctgcgagtctatgaacgcggcgcaggggagacccgcgcgtgcggcagc
ggcgcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgc
gtggaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatac
atgactggtccggcggcacatatctacgacggatttatccatttatga
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