Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_4122
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Entry
SCH_4122 CDS
T00240
Symbol
yjbN
Name
(GenBank) putative TIM-barrel enzymes, possibly dehydrogenases, nifR3 family
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sec03016
]
SCH_4122 (yjbN)
Transfer RNA biogenesis [BR:
sec03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
SCH_4122 (yjbN)
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Gene cluster
GFIT
Motif
Pfam:
Dus
PcrB
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
AAX68028
UniProt:
Q57GY4
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All DBs
Position
4398578..4399576
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AA seq
332 aa
AA seq
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MQPETQSSAFPAYRFSIAPMLDWTDRHCRYFLRLLSCQTLLYTEMVTTGAIIHGKGDYLA
YSEEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQ
LVADCVKAMRDVVSIPVTVKTRIGIDDQDSYAFLCDFINTVSGQGECEMFIIHARKAWLS
GLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKEHLRHMDGVMVGREAYQ
NPGILAAVDREIFGADTTDADPVAVVRAMYPYIERELSQGAYLGHITRHMLGLFQGIPGA
RQWRRYLSENAHKAGADVAVLEQALKLVADKR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgaaacccagtcctccgctttccctgcttatcgcttctccatcgcgcctatg
ctcgactggacggacagacattgccgctatttcctgcgtttgctgtcttgccagacgctg
ctctacaccgaaatggtgaccacgggcgcgattattcacggtaagggtgactatctggct
tatagcgaagaagagcatccggtcgctctacagcttggtggaagcgatccggctcagctt
gcgcattgtgcaaagctggcggaagcgcgtggctacgatgaaattaacctcaacgtgggg
tgcccttccgatcgcgtgcaaaacggtatgtttggcgcctgtttgatgggcaatgcgcaa
ctggtcgccgattgtgttaaagccatgcgtgatgtcgtctcgattccggtgacggtaaaa
acccgcattggtattgacgatcaggacagctatgcgtttctgtgtgatttcatcaatacg
gtttccggtcagggcgaatgcgagatgtttattatccatgcgcgcaaagcctggctttct
ggcttaagtccgaaagaaaatcgtgagatcccgccgctggattacccgcgcgtataccag
ctaaagcgggattttccgcacctgaccatgtccattaacggcggcatcaaatcgctggaa
gaggcgaaggagcacctgcgccatatggatggcgtcatggttggccgtgaagcttatcag
aatccgggtatactggccgcggtggatcgggagatctttggcgccgataccaccgatgcc
gacccggttgcggtggttcgcgcgatgtatccctatattgagcgtgaattgagccaggga
gcgtatctggggcatatcactcgccatatgctggggttgttccagggcatccccggcgcg
cggcagtggcgtcgctatctgagcgaaaacgcccataaagctggcgcggatgttgctgta
ctggagcaggcgctaaaactggtggcagacaagcgttaa
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