Salmonella enterica subsp. enterica serovar Dublin: SeD_A0817
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Entry
SeD_A0817 CDS
T00757
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sed03400
]
SeD_A0817
Enzymes [BR:
sed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SeD_A0817
DNA repair and recombination proteins [BR:
sed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SeD_A0817
Prokaryotic type
SeD_A0817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACH76347
UniProt:
A0A6C7A098
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All DBs
Position
812399..813820
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AA seq
473 aa
AA seq
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MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHGMAPRQAAFISAQLN
ALQAALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKT
LPSVICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVPAPKIRVSGA
LSTPLTPVSLNYPQQAFDAALFPVEENAVIAQLRQFCAQGADGYALRRDFPAVDGTSRLS
ASLATGGLSPRQCLHRLLAEHPQALDGGPGSVWLNELIWREFYRHLMTWYPALCKHQPFI
RWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQW
LPALRDIPGKAIHEPWRWAEKAGVVLDYPRPIVEHKQARIATLSAYEAARKGA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccatttagtctggttcaggcgcgatctgcgtttacaggataaccttgcgctg
gccgccgcctgccgcgatgcatccgcgcgggtgctggcgctttatatttccacccccgcg
cagtggcaggcccatggtatggcgccgcggcaggcggcattcatcagcgcgcagctcaat
gcgctacaggcggcccttgcagagaaaggcattccgctgctgtttcatgaagtggcggat
tttaacgccagtattgaaacggtcaaaaacgtttgccgacagcatgacgtcagccatctg
ttttataactatcagtatgagtttaacgagcgtcagcgtgatgcggcggtggaaaaaacg
ctgccctctgtcatctgcgaaggctttgacgatagcgtgattctggcgcccggcgcggtg
atgaccggcaatcatgaaatgtataaagtttttacgccgtttaaaaatgcctggttgaaa
cggctaaaagaggatattccgccgtgcgttccggccccgaagatccgggtgagcggcgcg
ctttctacacccttaacgccagtctcgcttaactacccgcaacaggcgtttgacgccgcg
cttttcccggtggaagaaaacgcggtcatcgcgcagctacgtcagttttgcgcgcagggc
gcagacgggtatgcgttacggcgcgatttccctgcggttgacggcaccagtcggctttcc
gccagcctggcgacgggcggcctgtcgccgcgacagtgcctgcaccgattactggcggag
catccgcaggcgctggacggcggaccgggaagcgtctggttgaatgaactcatctggcgg
gaattttaccgtcatttaatgacctggtatccggcattatgcaaacaccagccgtttatc
cgctggacaaaacgcgtcgcgtggcaggagaacccgcactattttcaggcatggcagaaa
ggcgaaaccggttatcccattgtcgatgcggcgatgcgccagcttaacgcgacgggctgg
atgcataaccgtttacgcatgattaccgccagctttctggtaaaagatctgttgattgac
tggcggttgggggagcgctatttcatgtcgcagcttattgacggcgatcttgccgccaat
aatggcggctggcagtgggccgcctcaaccggtactgacgccgcgccttattttcgtatt
tttaatcccacgactcagggagagaggttcgatcgcgacggcgaatttatccgccagtgg
ctaccggcattacgcgatatccctggaaaagcgattcacgagccgtggcggtgggcggaa
aaagcgggagtcgtgcttgattatcctcggcctattgtggaacacaaacaggcgagaatc
gcgacgctttccgcctatgaggcggcgagaaaaggggcgtga
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