Sedimenticola thiotaurini: AAY24_00540
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Entry
AAY24_00540 CDS
T03943
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds00730
Thiamine metabolism
seds01100
Metabolic pathways
seds01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AAY24_00540
Enzymes [BR:
seds01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AAY24_00540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AKH19081
UniProt:
A0A0F7JRM4
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Position
109695..111578
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AA seq
627 aa
AA seq
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MQSKDNTQSRHSVDTDNMAVESFPGSRKIYLQGSRPDIRVPMREISLTDTPASFGAEKNP
PVLVYDTSGIYTDPDAKIDLRAGLPEIRRNWIEERGDTERLSGVSSQFTRQRKENPELDA
LRFEHLREPRRAKSGANVTQMHYARKGIVTPEMEFIALRENMRLQEARDLGLLKQQHPGF
SFGAAIPKEITPEFVREEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSS
IEEEVEKMVWGIRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVGGIAE
DLNWEVMRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAQRVTGIVSRGGSILAKWCLAHHK
ENFLYTRFDEICEIMKAYDVSFSLGDGLRPGSIADGNDQAQFAELETLGELTKKAWEHDV
QVMIEGPGHVPMQMIKENMDKELQECYEAPFYTLGPLVTDIAPGYDHITSGIGAAMIGWY
GCAMLCYVTPKEHLGLPDKEDVREGIITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFR
WDDQFNLGLDPERAREYHDATLPKESAKVAHFCSMCGPKFCSMKISQDVREYANKKGLDD
LATAVEVGMSEKSQEFTAGGSEIYKEA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaaagacaacacgcagtcccggcattcggttgataccgacaacatggcggtc
gaaagctttcccggttcccgtaagatctacctgcaggggagtcgtcccgacatccgggtg
ccgatgcgtgagatctccctcaccgataccccggccagtttcggtgcagaaaaaaatccc
ccggtactggtctatgacacatccggtatctataccgaccccgatgcgaaaatcgacctg
cgcgcgggcctgccggaaattcgacgtaactggattgaggagcggggcgataccgagcga
ctctccggtgtcagctcccagtttacccgtcagagaaaagagaacccggaactggatgcg
ctgcgctttgagcatctgcgcgaaccgcgccgggccaaatcgggcgccaacgtcacccag
atgcactatgcccgtaagggtatcgtcaccccggagatggagttcatcgccctgcgcgag
aatatgcggctgcaggaggcccgggatcttgggttgttgaagcagcagcatccgggtttc
agtttcggcgccgccatccccaaggagatcacgccggaatttgtccgcgaagaggtggcc
cgtggtcgggccattatccccgccaatatcaaccacaccgagctggagccgatgattatc
ggccgtaacttcctggtcaagatcaacggcaatatcggcaactcagcgctgggttccagt
atcgaggaagaggtggagaagatggtctggggcattcgctggggtgccgataccatcatg
gacctctccaccggcaagaacattcacgaaacccgtgaatggattctgcgcaactcgccg
gtgccgatcggtaccgtgccgatctaccaggcgctggaaaaagtcggtggaatcgccgag
gacctgaactgggaagtgatgcgcgataccctgatcgaacaggccgagcagggggtggat
tacttcaccatccacgccggcgtgttgctgcgctacgtgcccatgaccgcacaacgggtg
accggcattgtctcccggggtggctccatcctggccaagtggtgcctggcccaccataag
gagaacttcctctacacccgttttgacgagatctgcgagatcatgaaggcctacgatgtc
tccttctccctgggtgacggtctgcgtcccggctccattgccgacggcaacgaccaggcc
cagttcgccgaactggagaccctgggtgaactgaccaagaaggcctgggagcacgatgtg
caggtgatgatcgagggcccgggtcatgtgccgatgcagatgatcaaggagaacatggat
aaggagttgcaggagtgctacgaggcgcccttctacaccctgggtccgctggtgaccgat
atcgctcccggttatgaccacatcacctccggtatcggtgccgccatgatcggctggtac
ggctgcgccatgctctgttacgtgacccccaaggagcatctcggtctgccggacaaggag
gatgtgcgggaagggattatcacctacaagattgcggcccacgcagcggacctggccaag
ggtcatccgggtgcccagatccgcgacaacgccatgtccaaggcgcgcttcgagttccgc
tgggatgatcagttcaacctggggctggatccggagcgggcacgggaataccacgatgcg
accctgcccaaggagtcggccaaggtggcccacttctgttccatgtgcggtcccaagttc
tgctccatgaagatctcccaggatgtgcgcgaatacgccaacaagaaagggctggatgac
ctggccacggcggttgaagtgggcatgagcgagaagtcccaggagttcaccgccggtggc
agtgagatctacaaagaggcctga
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