Sediminibacterium sp. TEGAF015: TEGAF0_10220
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Entry
TEGAF0_10220 CDS
T08564
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00470
D-Amino acid metabolism
sedt00550
Peptidoglycan biosynthesis
sedt01100
Metabolic pathways
sedt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TEGAF0_10220 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TEGAF0_10220 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TEGAF0_10220 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sedt01011
]
TEGAF0_10220 (ddl)
Enzymes [BR:
sedt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
TEGAF0_10220 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sedt01011
]
Precursor biosynthesis
Amino acid ligase
TEGAF0_10220 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
ATP-grasp
TTL
ATPgrasp_Ter
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
BDQ11805
LinkDB
All DBs
Position
complement(1168595..1169575)
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AA seq
326 aa
AA seq
DB search
MKRKVALVTGGLSGEAQISYKSALTVGNHVDRSKYDVYKIDINATGWWYASASGEKLPVN
KADFSILENNEKVVFDVALMCIHGTPGEDGKLQGYFDLIGLPYTSCDAATSALTMNKRYT
VAVASFGGIAVAKSMHLFSHTYVPVSEILSKLQLPLFVKPNNGGSSIGMSKVTSAEELEP
AIAKAFKEDHQILVEEFIGGREFTIGVFKQDGIIKVLPITEITTQNEFFDFEAKYQGKSV
ETTPALIDESMKAALEAAAKRVYEIFNCRGVVRVDFIYEEKQQKPFMLEVNTVPGQSDAS
VIPQQVRAMGMSLTDFYSAVIEQAFQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaaaagtagcactggttacaggtggtttaagcggagaagcacaaattagttac
aagagtgccttaacggtaggtaatcatgttgaccgatccaagtatgatgtgtataagatt
gacatcaatgcaacaggttggtggtatgcatctgcttcaggcgaaaaactgccggtgaac
aaagctgatttttccattctggagaacaatgaaaaagtggtatttgatgtggcattaatg
tgtattcatggcacaccgggagaagacgggaaattgcagggatattttgatttgattggt
ttaccctataccagctgcgacgcagccacgtctgctttaaccatgaacaagcgatataca
gttgctgtggcatcattcggtggtatagctgtggctaagtccatgcatttgttcagccac
acatatgttccggtaagcgaaatactatcaaaactgcaattgccattgtttgttaagccc
aataacggcggaagcagtatagggatgagcaaagttaccagcgcagaagaattagaacct
gccatagccaaagcttttaaggaagaccatcagattttggtggaagagtttattggagga
agagaatttaccattggtgtttttaagcaagacgggattattaaagttttgccaataaca
gaaataactacacaaaatgaattctttgattttgaagccaagtatcaggggaaaagtgta
gaaacaactcctgccctcattgatgaatcaatgaaagcggcattggaagcagcagctaaa
agggtatatgaaatctttaattgcagaggagttgttagggttgattttatatacgaagaa
aaacagcagaaaccttttatgctggaagtaaatacggttccgggtcaaagtgatgcttct
gtaattccgcagcaagtaagagcaatggggatgagcctgaccgatttttactccgcagta
attgagcaagcttttcaataa
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