Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_20240
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Entry
CFSAN002050_20240 CDS
T02734
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehdyrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Pathway
seec00250
Alanine, aspartate and glutamate metabolism
seec00310
Lysine degradation
seec00350
Tyrosine metabolism
seec00650
Butanoate metabolism
seec00760
Nicotinate and nicotinamide metabolism
seec01100
Metabolic pathways
seec01120
Microbial metabolism in diverse environments
Module
seec_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CFSAN002050_20240 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CFSAN002050_20240 (gabD)
00310 Lysine degradation
CFSAN002050_20240 (gabD)
00350 Tyrosine metabolism
CFSAN002050_20240 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CFSAN002050_20240 (gabD)
Enzymes [BR:
seec01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CFSAN002050_20240 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CFSAN002050_20240 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CFSAN002050_20240 (gabD)
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Motif
Pfam:
Aldedh
TilS
Motif
Other DBs
NCBI-ProteinID:
AGQ74120
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All DBs
Position
3870777..3872225
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AA seq
482 aa
AA seq
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MQLNDSTLFRQQAFIDGDWRDARGGDVIPVSNPANGKPLGNVPKMGAEETRDAINAANRA
LPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELARRAGIPAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLNQAVNKLAVGDGLQADVAIGPLIDEKAVAKVQEHIADALEKGARVITGGEA
HKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDEADVIRQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaacgactctaccctgttccgccagcaggcctttatcgatggcgactggcgc
gacgcgcgcggcggcgatgtcatccccgtgagcaaccccgccaacgggaaaccgctcggc
aatgtgcccaaaatgggggcggaagagacgcgcgacgccatcaacgccgccaatcgcgcc
ctgcccgcctggcgcgcgctcactgccaaagagcgagccaatatcctgcgtcgctggttc
aatctgatgatggaacatcaggacgatttggcgcgtctgatgacgctggaacagggcaaa
ccgctggcggaagcgaaaggcgaaattagctacgccgcctcgtttattgaatggttcgcc
gaagaggggaagcgtatctatggcgacacgattccaggtcatcaggccgataaacggctg
ctggtgattaaacagcccatcggcgtcaccgccgcgattaccccgtggaactttccctcg
gcaatgatcacccgtaaagccggccccgcgctggccgcaggctgcacaatggtactcaaa
cccgccagccagacgccgttttccgcgctggcgctggcggaactggcccggcgcgccgga
attcccgcaggcgtatttaacgtcgttaccggttcggcaggcgatattggcggcgagctg
accagcaacccgctggtacgcaaactgtcgtttaccggctcgacggagattggccgccag
ctaatggaacaatgcgccaaagacattaaaaaagtgtcgctggagttgggcggcaatgcg
ccgtttatcgtctttgacgatgccgatctggataaagccgtcgaaggcgcgctggcttcg
aagtttcgcaacgccgggcagacctgtgtctgcgccaatagattgtatgttcaggacggc
gtttacgatcgttttgcggaaaaactcaaccaggcggtaaataagctcgcggtcggcgac
ggcctgcaagccgacgtcgctatcgggccgctgattgatgaaaaagccgtggcgaaagtc
caggagcatatcgccgacgcgctggaaaaaggcgcccgcgtcattacgggcggtgaagcg
cacaaattgggcggcaacttctttcaaccgaccattctggcggatgttcctgataacgcg
aaagtcgccaaagaagagacattcgggccgctcgcgcctctgttccgcttcagcgacgag
gcggatgtcatcaggcaggctaacgataccgagttcggcctggcagcctatttttatgca
cgcgatttaagccgcgttttccgcgtcggcgaagcgctggaatacggcatcgtcggtatt
aataccggcattatctccaacgaagtcgcgcctttcggcggtattaaggcctccggatta
ggccgtgaaggttccaaatacggcatcgaagattatttagaaatcaaatatatgtgcatc
ggcctttaa
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