Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_2846
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Entry
UMN798_2846 CDS
T01782
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-E factor (sigma-24)
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sef03021
]
UMN798_2846 (rpoE)
Transcription machinery [BR:
sef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UMN798_2846 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AFD59542
LinkDB
All DBs
Position
complement(2778794..2779369)
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AA seq
191 aa
AA seq
DB search
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRA
LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPEN
LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDNKVQPLIRR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagttaacggaccaggtcctggttgaacgggtccagaagggagatcagaaa
gcctttaacttactggtagtgcgctaccagcataaagtggcgagtctggtttcccgctat
gtgccatcgggcgacgttcccgatgtcgtacaggaatcatttattaaggcctatcgcgcg
ctggattctttccggggggatagtgctttttatacctggttgtatcgtattgcggtcaat
accgcgaagaactacctggttgcgcaggggcgtcgtccgccttccagtgatgtagacgcg
attgaagcagaaaactttgaaagcggcggcgcgctgaaagaaatttcgaaccctgagaac
ttaatgttgtcagaagaactgagacagatagttttccgaactattgagtccctcccggaa
gatttacgtatggcaatcaccttacgggagctggatggcctgagctatgaagagatagcg
gctatcatggattgtccggtggggacggtgcgttcacgtatcttccgggcgcgggaagct
attgataataaagttcaaccgcttatcaggcgttga
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