Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_3975
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Entry
SPC_3975 CDS
T00862
Symbol
birA
Name
(GenBank) biotin--protein ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei00780
Biotin metabolism
sei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
SPC_3975 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sei03000
]
SPC_3975 (birA)
Enzymes [BR:
sei01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
SPC_3975 (birA)
Transcription factors [BR:
sei03000
]
Prokaryotic type
Helix-turn-helix
Other families
SPC_3975 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
HTH_11
HTH_24
MarR_2
FloA
HTH_5
HTH_Crp_2
HTH_1
Linker_histone
Motif
Other DBs
NCBI-ProteinID:
ACN48043
UniProt:
C0Q2Q7
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All DBs
Position
4038166..4039128
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AA seq
320 aa
AA seq
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MKDTTVPLTLISLLADGEFHSGEQLGERLGMSRAAINKHIQTLRDWGVDVFTVSGKGYSL
PEPIQLLDADRIHSQLDSGNVAVLPVIDSTNQYLLDRIGELRSGDACVAEYQQAGRGRRG
RKWFSPFGANLYLSMYWRLEQGPAAAIGLSLVIGIVMAEVLRELGADKVRVKWPNDLYLL
DRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEEDVINQAWITLQEAGITLDRNMLAA
KLIYKLRAALELFEQEGLSPYLSRWKKLDNFIDRPVKLIIGDKEIFGISRGIDTQGALLL
EQDGVIKPWMGGEISLRSAE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatactaccgttcccctgacgctgatctcactacttgccgacggagagtttcac
tcaggcgagcagttgggtgaacggctgggaatgagccgcgcggctattaataaacatatc
cagacattacgcgactggggagtagatgtatttaccgtttccgggaaaggatatagctta
ccggaacccatccagttactggatgctgaccgtatacatagccaactggatagcggaaac
gtggcggtattgcccgttatcgattcaaccaatcagtatttacttgatcgaattggcgag
ctgcgttcaggtgatgcctgtgtagcagaataccaacaggcggggcgtggtcgtcgcggg
cgtaaatggttctcaccgtttggtgcgaatctatatctttcaatgtactggcgtctggag
caggggcctgcggcggcaataggcttgagtctggtcattggaattgtgatggcggaagtg
ctgcgtgaactgggcgcagataaagttcgtgtgaagtggcctaacgacctttacctattg
gaccgcaaactggcgggtattctggtcgagttaaccggtaaaacgggcgatgccgcacaa
atagtgattggcgctggtattaacatggcaatgcgtcgcgtagaagaggacgtgataaat
caggcatggatcacactacaagaggccggaattacgctcgaccgcaatatgctggccgca
aagctgatttataagttacgtgctgcgcttgagctttttgagcaagaaggactttctcct
tatctttcgcgctggaaaaaactggataattttattgatcgtccggtaaaactaattatt
ggcgacaaagaaatatttggtatttctcgcggcattgatactcaaggcgcattattgctt
gaacaggatggcgtgattaaaccctggatgggcggagaaatatcgctgcgaagcgccgaa
tag
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