Saccharopolyspora erythraea: SACE_3353
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Entry
SACE_3353 CDS
T00492
Name
(GenBank) helicase RecD/TraA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sen
Saccharopolyspora erythraea
Pathway
sen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SACE_3353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sen03400
]
SACE_3353
Enzymes [BR:
sen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SACE_3353
DNA repair and recombination proteins [BR:
sen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SACE_3353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_4
AAA_30
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
AAA_22
Helicase_RecD
PIF1
AAA_16
HHH
PhoH
nSTAND3
UvrD_C
TrwB_AAD_bind
ABC_tran
SLFN-g3_helicase
AAA_28
HHH_2
AAA
Motif
Other DBs
NCBI-ProteinID:
CAM02628
Kitasato:
SACE_3353
Cambridge:
SACE_3353
UniProt:
A4FF03
LinkDB
All DBs
Position
3702814..3705081
Genome browser
AA seq
755 aa
AA seq
DB search
MAGREPGAVRGQPGAPNGQVSAPARGAVLEGTLERITFANEETGYTVARVDTGRGGDLVT
VVGALLGAQPGEALRMRGRWGSHPQYGRQFHVDDYATVLPATVQGIRRYLGSGLIKGIGP
KLAEKIVEHFGTAALDVIEQEPQRLVEVPKLGPKRTRLIAEAWEEQKAIKEVMVFLQGVG
VSTSLAVKIYKQYTDDAIRVVKEEPYRLAGDVWGIGFKTADTIAKAVGIPHDSPQRVKAG
LQFTLSESTGEGNCFLPETELIAEAVKILTVDTGLVIECLAELVEEEGVVREEIPGEDAE
VPTAAIYLVPFHRAEVALAAQLTRLLRTSADRMPAFASVDWDKAMGWLRRTTGAELAEGQ
ERAVRLALTEKVAVLTGGPGCGKSFTVRSIVELARAKRAKVVLAAPTGRAVKRLTELTGH
EAATVHRLLQLQPGGDAAFDRDNPLDADLVVVDEASMLDLLLANKLAKAVPAGAHLLLVG
DVDQLPSVGAGEVLRDLLAEGTPIPHVGLNEVFRQAAESGVVTNAHRINAGEHPRTHGLD
DFFLFQVDEPDVTAELTVDVVARRIPRRFGLNPRTDVQVLAPMHRGPAGAGALNQLLQDA
ITPGRPGLPERRFGGRVFRVGDKVTQIRNNYDKGASGVFNGTQGVVSALDEEAQTLTVRT
DEDEDVDYDFAELDELVHAYAVTIHRSQGSEYPCVVIPLTTSAWMMLQRNLLYTAVTRAK
KLVVLVGSKKALGQAVRAVGSGRRHTALDHRLRAA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggccgcgagccgggcgcggtgcgcgggcagcccggcgcgccgaacgggcaggta
agcgcgcccgcccgtggcgcggtgctcgaaggcacgctggagcgcatcaccttcgccaac
gaggagaccggctacacggtggcccgggtcgacaccggtcgcggcggcgacctcgtgacg
gtcgtcggcgcgctgctgggcgcccagcccggggaagcgctgcggatgcgcgggcggtgg
ggttcgcacccgcagtacggccgccagttccacgtcgacgactacgccacggtgctgccc
gccaccgtgcagggcatccggcgctacctgggttccgggctgatcaagggcattgggccc
aagctcgccgagaagatcgtcgagcacttcggcaccgccgccctcgatgtcatcgagcag
gagccgcagcggctcgtcgaggttcccaagctcggcccaaagcgcaccaggctgatcgcc
gaggcgtgggaggagcagaaggcgatcaaggaggtgatggtcttcctccagggtgtcggc
gtgtcgacctcgctggccgtcaagatctacaagcagtacaccgacgacgcgatccgcgtc
gtgaaggaggagccctaccggctggccggtgacgtgtgggggatcgggttcaagaccgcc
gacacgatcgccaaggcggtcggcatcccgcacgactcgccgcagcgggtcaaggcgggc
ctgcagttcacgctttcggagtccaccggcgagggcaactgcttcctgcccgagaccgag
ctgatcgccgaagcggtgaagatcctgaccgtcgacaccggtctggtgatcgaatgcctc
gccgagctcgtcgaggaggaaggcgtggtccgggaggagatcccgggcgaggacgccgag
gtgccgaccgcggcgatctacctggtgcccttccaccgggccgaagtggcgttggcggcc
cagctgacgcggctgctgcgcaccagcgccgaccggatgcccgccttcgcctccgtggac
tgggacaaggcgatgggctggctgcgccgcaccaccggggccgaactggccgaaggccag
gagcgggcggtgcggctggcgctgaccgagaaggtcgcggtgctgaccggtggtccgggc
tgcggcaagagcttcacggtgcgctcgatcgtcgagctggccagggcgaagcgggcgaag
gtggtgctggcggcgccgaccggccgggccgtcaagcgcctcaccgagctgaccggccac
gaggccgccaccgtgcaccggctcctgcagctccagcccggcggggacgccgcgttcgac
cgcgacaacccgctcgacgccgacctggtcgtggtcgacgaggcgtccatgctcgacctg
ctgctggccaacaagctcgccaaggcggtccccgccggagcgcacctgctgctggtcggc
gacgtcgaccagctcccgtcggtcggcgcgggcgaggtgctgcgcgacctgctcgccgag
gggacgccgatcccgcacgtggggctgaacgaggtgttccgccaggccgcggagtccggc
gtggtcaccaacgcgcaccggatcaacgccggcgagcacccgcgcacgcacggcctcgac
gacttcttcctgttccaggtcgacgagcccgacgtcaccgccgagctgacggtcgacgtc
gtcgcgcggcgcatcccgcgcaggttcggtctcaacccccgcaccgacgtgcaggtcctg
gcgccgatgcaccgcgggccggccggggcgggcgcgctgaaccagctcttgcaggacgcg
atcacgcccggcagaccgggcctgcccgagcggaggttcggcggccgggtgttccgggtc
ggcgacaaggtcacccagatccgcaacaactacgacaagggcgccagcggcgtcttcaac
ggcacgcagggcgtagtgagcgcgctggacgaagaggcccagacgctcacggtgcgcacc
gacgaggacgaggacgtcgactacgacttcgccgagctggacgagctcgtgcacgcctac
gccgtcacgatccaccgctcgcagggcagcgagtacccgtgcgtggtgatcccgctgacc
accagcgcctggatgatgttgcagcgcaacctgctctacacggcggtgaccagggcgaag
aagctggtggtgctggtcgggtcgaagaaggcgctcggtcaggcggtgcgcgcggtcggc
tccggccgccgccacaccgcgctggaccaccggctgcgcgcggcgtga
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