Streptomyces endophytica: OJ254_01730
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Entry
OJ254_01730 CDS
T09208
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
seng
Streptomyces endophytica
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Gene cluster
GFIT
Motif
Pfam:
HTH_30
HTH_8
GGDEF_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UZJ29437
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Position
392313..393587
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AA seq
424 aa
AA seq
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MRGDYQQLVDEISAALGAPATLEDRDFGLIAFGAHEGEDDEVMDPVRTRSILQRRSSAAV
RAWFEAFGIARATTPLRIPPDPAAGVFRGRICLPVRHRGVVHGYVWLLDDGHLTDLALGG
HGTPPDPRIAQAMETAARIGALLADEARAGSELGDLLRELLTGPATGRPAAATALRDALR
DTLRFTPGLPLALVAVTPWDTSDTDAAPLPSLPGLLAACALRSPGGPTGPPGPPVLAALV
RLRATGGAAPARTVAEHLLRSPRAGSAPATAAPSGPGGSRSSARSAPPRPGAAGIGGATR
EPAELPTSWQEALAAARAARAEPRLGPVAQWDTIGSYRMLTALPVTDPDPVIGPLLTPAH
AELARTAEVFLDCAGQASRTAQALGIHRQTLYYRLGRVEKLTGLDLDDGEHRLLLHMALK
VARL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgactaccagcagctcgtggacgagatctcggcggcgctcggcgcaccggcg
acgctggaggaccgggacttcgggctgatcgcgttcggcgcgcacgagggcgaggacgac
gaggtcatggacccggtgcggacccggtcgatcctccagcgccgctcctcggcggcggtc
cgggcctggttcgaggcgttcgggatcgcccgggccacgacgccgctgcggatcccgccg
gacccggccgccggcgtcttccgcggccggatctgcctccccgtacgccaccggggcgtg
gtgcacgggtacgtctggctgctcgacgacgggcacctcaccgacctggccctgggcggc
cacggcaccccgcccgacccgcggatcgcccaggcgatggagaccgccgcccggatcggc
gcactgctggccgacgaggcccgcgccggctccgaactcggcgatctgctacgggagttg
ctgaccggcccggccaccggccggccggccgcggcgaccgccctgcgcgacgcgctccgc
gacacgctgcgcttcacgcccggtctgccgctcgccctggtggcggtgacgccctgggac
acctcggacaccgatgcggcccccctgccgagcctgcccggtctgctcgcggcgtgcgca
ctgcgctcccccggcggtccgacgggcccgcccggcccgcccgtcctggccgcgctggtc
cgcctgcgtgctacgggcggggcggcccccgcccgtacggtggcggaacacctgctgcgc
tccccgcgggcggggagcgccccggccaccgcggccccctccggccccgggggttcccgt
tcttccgctcgctccgcaccaccccgcccgggcgcggccggcatcggcggtgccacccgg
gaaccggccgaactccccacgtcctggcaagaggccctcgccgcggcccgcgcggcccgc
gccgagccccggctgggcccggtcgcccagtgggacaccatcggctcgtaccgcatgctg
accgccctgccggtcaccgatcccgaccccgtgatcggccccctgctcacccccgcacac
gccgaactcgcccgcaccgccgaggtgttcctcgactgcgcgggccaggcgagccgcacg
gcccaggccctgggcatccaccgccagaccctctactaccgcctcggccgcgtcgaaaag
ctcacgggtctcgacctggacgacggggagcaccggttgcttctccatatggccctcaag
gtggcgaggttgtaa
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