Streptomyces endophytica: OJ254_15065
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Entry
OJ254_15065 CDS
T09208
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
seng
Streptomyces endophytica
Pathway
seng00550
Peptidoglycan biosynthesis
seng01100
Metabolic pathways
seng01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OJ254_15065 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OJ254_15065 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
seng01011
]
OJ254_15065 (mrdA)
Enzymes [BR:
seng01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OJ254_15065 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
seng01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
OJ254_15065 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UZJ31388
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All DBs
Position
3376069..3378219
Genome browser
AA seq
716 aa
AA seq
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MTHLPETRTSRVSVRLIAIQILVFSLLLTLGGRLWYLQIRNGREYATEARNNHVQQVVDP
ATRGSILDARGVPLADNQTRLVVSASRTDLLKMKDDGKAVLGRLAKVLGMSEKEIRNKVR
LCDSKTPQPCWNGSPYQPIPITDEATTQQALQIRERSEDFPGIIAEPTAVRRYPAPVGAN
TAQVLGYLSPVTDEEINKAKNTRSPLLRSDQIGRSGLERTYDKYLRGKAAVTRYEVDNLG
RVIGQAKSEKGQAGSSIVTSIDARVQALAEKQLDQAMKDARKVHDKNTGTNYKADSGAVV
VMEAKTGRVVAMASNPSYDPNAWVGGISGKDYARLTGKDSNYPLLNRAIQGQAAPGSIFK
VISTTAAVNAGYDFNGHYPCTSSYSIGGQVFRNFEGEGHGDISLGRALEVSCDTVFYRLS
HEEWKKDGGDKPKKDPNDWFYRTAHQFGLGKETGIDLPNEVNGRVPDRRWKHNFWKANKD
GWCQQAKAWPKKKDYTTKLAREGCLEGMKLHAYDSINYAIGQGDTLVTPIQMATIYAAIS
NGGTLFNPTVGKAIVSPDGKHIQQIAPQSHGKLPDSPHTLRQIDSALAGVATRGTAAWRF
QGWPQDKIPMHAKTGTAEVYGKQTTSWFATYTKDYTIVMTISQGGTGSGASGPAVRNIYN
ALYGIDEKGGIDPKAALLPRPQGKLPKIESDGTIEAQPIKPYVPPSPSPSPSGSPQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgacccatctgcccgaaacccgcacgtcgcgggtgagcgtccggctcatcgcgatccag
atcctggtcttctccctgctgctcaccctcggcggccggctctggtacctgcagatccgc
aacggccgggagtacgccaccgaagcgcgcaacaaccacgtccagcaggtcgtcgacccc
gccacccgcggctccatcctcgacgcgcgcggcgtgccgctggccgacaaccagacccgg
ctggtcgtctccgccagccgcaccgacctgctgaagatgaaggacgacggcaaggccgtg
ctcggccggctcgccaaggtgctcggcatgtccgagaaggagatccgcaacaaggtgcgg
ctctgcgactccaagaccccgcagccgtgctggaacggctcgccgtaccagccgatcccg
atcaccgacgaggccaccacccagcaggccctgcagatccgcgagcggtccgaggacttc
cccggcatcatcgccgagcccaccgccgtccgccgctatccggccccggtcggcgccaac
accgcgcaggtgctcggctacctctcgccggtcaccgacgaggagatcaacaaggccaag
aacacccgctcgccgctgctccgctcggaccagatcggccgctccggcctggagcgcacc
tacgacaagtacctgcgcggcaaggccgccgtcacccgctacgaggtcgacaacctcggc
cgggtcatcggccaggccaagagcgagaagggccaggcaggttcgtcgatagtcaccagc
atcgacgcccgggtgcaggcgctggcggagaagcagctggaccaggccatgaaggacgcc
cgtaaggtgcacgacaagaacaccggcaccaactacaaggcggactccggtgccgtggtc
gtgatggaggcgaagaccggccgggtggtggcgatggcctccaaccccagctacgacccc
aacgcctgggtcggcggcatctcgggcaaggactacgcccgcctcaccggcaaggactcc
aactacccgctgctgaaccgcgccatccagggccaggccgcccccggctcgatcttcaag
gtcatctcgaccacggcggcggtcaacgcgggctacgacttcaacggccactacccctgc
accagctcgtacagcatcggcggccaggtcttccggaacttcgagggcgagggccacggc
gacatcagcctgggccgggcgctggaggtctcctgcgacaccgtcttctaccggctctcg
cacgaggagtggaagaaggacggcggcgacaagccgaagaaggaccccaacgactggttc
taccggaccgcccaccagttcggactcggcaaggagaccggcatcgacctccccaacgag
gtcaacggccgggtccccgaccgccggtggaagcacaacttctggaaggccaacaaggac
ggctggtgccagcaggccaaggcctggccgaagaagaaggactacaccaccaagctcgcc
cgtgagggctgcctcgaaggcatgaagctgcacgcctacgactcgatcaactacgccatc
ggccagggcgacaccctcgtcacccccatccagatggcgacgatctacgccgcgatcagc
aacggcggcaccctcttcaacccgaccgtgggcaaggccatcgtcagccccgacggcaag
cacatccagcagatcgcgccgcagtcgcacggcaagctgccggacagcccgcacaccctc
aggcagatcgactccgcactggccggcgtcgccacccgcggtaccgccgcctggcgcttc
cagggctggccgcaggacaagatcccgatgcacgccaagaccggtaccgccgaggtctac
ggcaagcagaccacctcgtggttcgcgacgtacaccaaggactacacgatcgtcatgacg
atctcccagggtggtaccggatccggagcctccggcccggccgtgcgcaacatctacaac
gccctgtacggcatcgacgagaagggcggcatcgaccccaaggccgccctgctgcccagg
ccgcagggcaaactgcccaagatcgagagcgacggcaccatcgaggcccagcccatcaag
ccctacgtcccgccgtccccgtcgccctcaccctcggggagcccccagtga
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