Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_02985
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Entry
CFSAN001992_02985 CDS
T02479
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
senj03016
]
CFSAN001992_02985
Enzymes [BR:
senj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CFSAN001992_02985
Transfer RNA biogenesis [BR:
senj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFSAN001992_02985
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
ODP
Motif
Other DBs
NCBI-ProteinID:
AGF80921
LinkDB
All DBs
Position
complement(556506..558440)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQH
EFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSK
LDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAF
FAATIESKAKLAYDNVSDWLENNGTWQPDNEGIAQQIRLLHRNCLSRSEWRHHHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFD
PANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRM
AERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaggttgacgcg
caaaaaagctatttcattcctccgccgcagatgaaaaaagtgatgcatggcgatcgtatc
gtcgcggtcatccacacggaaaaagaacgggagtctgccgagccggaagaactgatcgaa
ccgttcctgacgcgctttgtgggaaaagttcagggtaaaaatgaccgcctgtccatcgtg
ccggatcatccgttgctgaaagacgcgattccctgccgcgccgcgcgcggcgttcagcat
gagttcaaagaaggtgactgggcggttgctgaaatgcgccgccatccgcttaaaggcgac
cgttcgttttacgccgatttaacgcagtacatcacctttgccgacgatcactttgttccc
tggtgggttacgcttgcccgccacaacctggaaaaagaagcgccgaacggcgtagcgacg
gagatgctggacgaagggctggagcgccaggatctgaccgcgctgaatttcgtcactatc
gatagcgccagcactgaagatatggatgacgcgctttatgctgaggaattagcggacggc
agactccagcttacggtggctatcgccgatcctaccgcctggattgccgaaggcagtaag
ctggataacgccgcgaaaattcgcgccttcaccaactacctgccgggcttcaatattcct
atgctgccgcgtgagctgtctgacgatctgtgctcactgcgcgccaacgaagtgcgtccg
gcgctcgcctgtcgcatgataatcgccgcagacggcaccattgacgatgatatcgccttt
tttgcggccaccatcgaatcgaaggccaagctggcgtacgacaatgtctccgactggctg
gaaaataacggcacctggcagccggataacgaaggcattgcccagcagattcgtctgttg
caccgtaattgtctaagccgcagtgagtggcgtcatcatcatgcgttagtctttaaagac
cgcccggattatcgctttgtgcttggcgaaaaaggcgaagtactggatattgtggcggaa
ccgcgccgtatcgctaaccgtatcgtagaagagtcgatgatcgccgctaacctttgcgcc
gcgcgcgtactgcgcgataagctcggtttcggtatttacaacgtacatacgggcttcgat
cccgcgaatgccgacgcgctggccgcactgctgaaaacgcatggtcttcatgtcgatgcc
gaagaggtgctgacgctggaaggcttctgtaaactgcgtcgcgaactggatgcgcagccc
tccggtttccttgacagccgcattcgtcgcttccagtcttttgcggaaatcagcaccgag
ccggggccgcatttcggtcttggtcttgaggcttacgccacctggacctctcccatccgt
aagtatggcgatatgattaaccatcgcctgctgaaagcggtcatcaagggggaggctatt
gcgcgtccgcaggaagatatcacccagcaaatggcggaacgccgtcgcctgaaccgtatg
gcggagcgcgatgtcggcgactggttatatgcacgcttccttaacgataaggcggggaca
aatacccgtttcgcggcagaaattattgacgtcagccgcggtggtatgcgtgtgcgactg
gtcgataacggcgctatcgcctttatcccagctccgttcctgcacgccgttcgcgatgaa
ctggtatgcagccaggaaaacggtacggtacagattaaaggtgagacggtttataaagtg
acggatgtcattgatgtcactattgcggaagttcgcatggaaacccgcagcattattgcc
cgaccggcagcgtaa
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