Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_26730
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Entry
SN31241_26730 CDS
T02779
Name
(GenBank) HTH-type transcriptional regulator ydcR
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AGS29645
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Position
complement(2709578..2711002)
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AA seq
474 aa
AA seq
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MKKYQRLAEQIREQIASGVWQPGDRLPSLREQVASSGMSFMTVGHAYQLLESQGRIIARP
QSGYYVAPHPVCRSVATAAHVIRDEAVDINTYIFEMLQASRDTSVVPFASAFPDPRLFPL
PQLNRSLAQVSKTATAMSVIENLPPGNAELRYAIARRYAQQGITVSPDEIVITAGALEAL
NLSLQAVTAPGDWVVVENPCFYGALQALERLRLKALSIPTDVKEGIDLMALEQALQEYPV
KACWLMTNSQNPLGFTLSAEKKARLVALLTHHNVTLIEDDVYSELYFGREKPLPAKAWDR
DDTVLHCSSFSKCLVPGFRIGWVAGGSHARQIQRLQLMSTLSTSSPMQLALVDYLSTRRY
DAHLRRLRRQLAERKQQAWQTLLRHLPAEVKIHHNDSGYFLWLELPEQLDAGELSAKALE
HLISIAPGKMFSTSGAWTRFFRFNTAWHWGEREEQAVKQLGSLIREMLSAKSLV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatcaacgtctggcggagcaaattagagaacaaatcgcctctggcgtttgg
cagcccggcgatcgattaccctcgctgagggagcaggtcgccagtagcggcatgagtttt
atgactgtcggtcatgcgtaccagttgctggaaagtcagggacggattatcgcccgtccg
caatccggttattatgtcgcgccgcatccggtttgtcggtcagtcgcgacggcagcgcac
gttattcgggatgaagccgtagatatcaatacctatatttttgagatgctgcaggccagt
cgtgatacctcagtggtgccctttgcttcagcgtttcccgatccgcgcctgtttcccttg
ccgcaattgaaccgctctctggcgcaggtcagcaaaaccgcgacggcaatgagcgtcatc
gaaaacttgccgccaggtaatgcagaattgcgctatgcgatagcacgccgttacgcgcag
caggggattaccgtttctcctgacgagattgtcattaccgccggcgcgctggaagcgttg
aatcttagtttacaggcggtgacggcgccgggagactgggtggtggtggagaacccctgt
ttctacggtgcgctacaggccctggagcgattgcgcctgaaagcgttgtcgatacctacc
gatgttaaagaaggtatcgatcttatggcgctggaacaggcgttacaggaatatccggtg
aaagcgtgctggttaatgaccaacagtcagaatccattagggttcacgctgagtgctgag
aaaaaagcgcggctggtcgcgttactcacgcaccataacgtgacgctaattgaagacgat
gtttatagcgaactctactttggccgcgagaaacctctgcctgccaaagcatgggatcgc
gacgataccgtgttgcattgttcgtctttttccaaatgtctggttcccggttttcgcatt
ggctgggttgcgggaggaagccatgccagacaaattcagcgtttgcagttaatgagcaca
ttatccaccagttcccccatgcaattggcgttagtggattatctctcgacacgtcgatat
gacgcgcatctgcgccgattgcgaaggcagcttgccgaacgtaaacagcaagcctggcaa
acccttttgcgccatctcccggcggaagtaaaaattcaccataacgatagcggttatttt
ctttggctggagctacctgagcagcttgatgccggtgaacttagcgccaaagcacttgaa
caccttatcagtatcgcaccggggaaaatgttttcaacgtccggcgcctggacgcgtttc
tttcgttttaacaccgcatggcattggggagaacgggaagaacaggccgtaaaacagctt
ggcagcctgattcgcgagatgctgagcgctaaaagccttgtgtga
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