Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_11260
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Entry
TY21A_11260 CDS
T02648
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Pathway
sent03030
DNA replication
sent03430
Mismatch repair
sent03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TY21A_11260 (holA)
03430 Mismatch repair
TY21A_11260 (holA)
03440 Homologous recombination
TY21A_11260 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sent03032
]
TY21A_11260 (holA)
03400 DNA repair and recombination proteins [BR:
sent03400
]
TY21A_11260 (holA)
Enzymes [BR:
sent01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TY21A_11260 (holA)
DNA replication proteins [BR:
sent03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TY21A_11260 (holA)
DNA repair and recombination proteins [BR:
sent03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TY21A_11260 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AGK67790
LinkDB
All DBs
Position
2287802..2288833
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTD
WGSLFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKA
QENAAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNLQLDDAANQLLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGDALQRLHPAQLRQ
AVQLLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggttgtatcctgaacaactccgcgcgcagctcaacgaagggctgcgtgcggca
tatctattattgggcaacgatccgctgctgctgcaggaaagtcaggacgctattcgtctg
gcggctgcgtcgcaaggcttcgaagagcaccacgcttttactctcgatcccagtaccgac
tggggatcgcttttctcactctgccaggcgatgagcctgttcgccagccgccaaacgctg
gtgctgcaactgccggaaaacgggcctaacgcggcaatgaatgagcaactcgccaccctg
agcgagctactgcatgacgacctgttattaatagtacgcggaaacaagctcaccaaagcg
caggaaaacgccgcctggtataccgcgctggcagatcgtagcgttcaggtcagttgtcag
acgccggagcaggcgcagcttccccgctgggtggccgccagagcgaaagcacagaatttg
caactggatgacgccgcgaaccaactgctgtgctattgctatgagggcaatctgttggcg
ctggcgcaggcgctggaacggctgtcgctgctttggcctgacggtaagttaacgcttcct
cgcgtggagcaggccgtcaatgacgccgcccactttacccctttccactgggtggatgcg
ttactgatggggaaaagcaaacgcgcgctgcatatcctgcaacagctacgccttgaaggc
agcgaaccggttattctgctgcggaccctccagcgagagctgctgctactggtaaatctc
aaacgtcagtccgcgcatacgccgttacgcgcgctgtttgataaacaccgggtctggcaa
aaccgtcgccccatgatcggcgacgcgttgcagcgtctccatcctgcacagcttcgccag
gccgtgcagttactgacgcgtacagaaattacgctcaaacaggattatggtcagtcggta
tgggcagatcttgaagggctgtcgctcctgctctgccataaggcgctggcagacgtattt
attgatgggtga
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