Staphylococcus epidermidis RP62A (MRSE): SERP0564
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Entry
SERP0564 CDS
T00229
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ser
Staphylococcus epidermidis RP62A (MRSE)
Brite
KEGG Orthology (KO) [BR:
ser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ser03110
]
SERP0564 (clpB)
Chaperones and folding catalysts [BR:
ser03110
]
Heat shock proteins
HSP100
SERP0564 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
AAA_14
AAA_7
bpMoxR
nSTAND3
TniB
IstB_IS21
ATPase_2
DUF815
AAA_18
RuvB_N
Mg_chelatase
RNA_helicase
NACHT
AAA_28
Roc
DNA_pol3_delta2
AAA_3
Zeta_toxin
AAA_24
AAA_33
AAA_19
DUF87
HOOK
T2SSE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAW53951
UniProt:
Q5HQI5
LinkDB
All DBs
Position
555678..558287
Genome browser
AA seq
869 aa
AA seq
DB search
MDINQMTYAVQGALQKAVAYSKEYELQNIEVEALLKAAMNENDSLFKSILERANIDVDQL
IKAYDNQLSHYPTVQGDNVQYGQYISAKTNELLDKAEKYMKSYEDEFISMEHILRAAIDT
DETTQKWVGNKVEVIKEIITKVRGGNHVTSQNPEVNYEALEKYGRDLVEEVRQGKMDPVI
GRDEEIRNTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPESLLDKTIFELD
LSALVAGAKYRGEFEERLKAVLKEVKESEGRIILFIDEIHMLVGAGKTDGAMDAGNMLKP
MLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYH
GVRIQDRALVAAAELSDRYITDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQ
LEIEESALKNESDNPSKHRLEELQEELSNEKEKQSSLKSRVEQEKEKIAKVQEKRAELDS
SRQALEDAQTEGNLEKAAELQYGTIPQLEKELQKFEEAFQDETGEDSERMIREVVSDEEI
GDIVSQWTGIPVSKLVETEREKLLSLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNR
PIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRLIGAPPGYVGH
DEGGQLTEAVRRNPYSVILLDEVEKAHSDVFNVLLQILDEGRLTDSKGRSVDFKNTIIIM
TSNIGSQVLLENVKDAGEISDDTEKAVMDSLHAYFKPEILNRMDDIVLFKPLSVNDMSMI
VDKILTQLNMRLLDQHISIEVTEEAKKWLGEEAYEPQFGARPLKRFVQRQIETPIARMMI
KESLPEGTIIKVDLNDNKELDFKVVKPTS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
ttggatattaatcaaatgacatatgctgtacaaggtgccttacaaaaagcagtcgcgtac
agtaaagaatatgaattacaaaacattgaagttgaagcattgttaaaagctgcaatgaat
gaaaatgatagtttatttaaaagtatattagaacgagcaaatattgatgttgatcaatta
ataaaagcatacgataatcaattaagtcattatccaactgtacaaggtgacaatgttcag
tatggacagtatattagtgctaaaacaaatgaattattagacaaagccgagaaatatatg
aagtcctatgaagatgagtttatttctatggagcatatattacgtgcagccatagatact
gatgaaactactcaaaaatgggtcggcaataaagtagaagtgataaaagaaattataact
aaagttagagggggaaatcatgtgacatctcaaaatccagaagtaaactatgaagcttta
gaaaaatatggtcgtgatcttgtagaagaagtacgtcaaggtaaaatggaccctgtcatc
ggtagagatgaagaaatacgtaatacaattcgtatattaagtcgaaaaacaaaaaataat
ccggttttaatcggtgaaccaggtgtaggtaaaactgcaattgttgaaggtttagcacaa
cgaattgtacgtaaagacgttccagaatcattactcgataaaacgattttcgagcttgat
ttaagtgccttagttgcaggtgcaaaatatagaggtgaatttgaagaacgtttaaaagca
gtattgaaagaagtaaaagaatctgaaggtcgaatcatcttattcattgatgaaattcat
atgttagtaggcgctggtaaaactgatggtgctatggacgcaggaaacatgttgaaacca
atgcttgcgcgtggtgaattgcattgtataggtgctacgacattaaatgaatatcgtgaa
tatattgaaaaagattcagcattagaacgtcgtttccaaaaagttggggtcagtgaacct
gatgttgaggatacaatatcaattttacgtggtctaaaagaacgttatgaggtctaccat
ggtgtacgtatacaagaccgtgcacttgttgcagcggctgagctatctgatagatatatt
accgatagatttttgccagataaagctatagatttagtcgaccaagcgtgtgcgacaata
cgtacagaaatgggatcaaatccaacagagttagaccaagtaaatcgtcgagtaatgcaa
ttagaaattgaagaaagtgccttgaaaaatgaatctgataacccaagtaaacatcgttta
gaagagcttcaagaggaattatctaatgaaaaagaaaaacaatcctctttaaaatcacgt
gttgaacaagaaaaagaaaaaattgctaaagtacaagaaaaacgtgctgaactagatagt
agtcgtcaagctcttgaagatgcacaaacagaaggtaatcttgaaaaagcagcagaatta
caatatggtacaattccgcaattagaaaaagaattgcaaaaatttgaggaagcctttcaa
gatgaaactggcgaagatagtgaaagaatgattcgtgaagtcgtttcagatgaagaaata
ggcgacatagttagtcaatggacaggtatacctgtatctaaacttgtggaaacagaaaga
gaaaagctattaagtttaagtgacatcttacacaaacgtgtagtaggtcaagataaagca
gttgatttagtatcagacgcagtagttagagcacgtgctggaattaaagatccgaataga
ccaatcggaagtttcttattcttaggacctactggagtaggtaaaactgaattagcaaaa
tcgcttgcttcatcacttttcgattctgaaaaacatatgattagaattgatatgagcgaa
tatatggaaaaacatgctgtatcacgtttaattggtgcacctccaggttatgtaggtcac
gatgaaggtggtcaattaactgaagcagttagacgtaatccatactcagttattttgtta
gacgaagttgaaaaagcacatagcgatgtttttaatgtattacttcaaatactagatgaa
ggtcgtcttacggattctaaaggtagaagtgttgactttaaaaataccattatcatcatg
actagtaatattggttcacaagtattacttgaaaatgtaaaagatgctggtgaaattagt
gatgatacagagaaagcagttatggacagtctacatgcatacttcaaacctgaaatatta
aatcgtatggatgacatcgtgttatttaaaccattatcagttaatgatatgagtatgatt
gtagataaaattttaacacaattaaatatgagattattagatcaacatatctcaattgaa
gtgacagaagaagcgaaaaaatggctaggtgaagaagcgtatgaaccacaatttggtgca
agaccattaaaacgctttgttcaacgacaaatagaaactccaattgcacgtatgatgatt
aaagaaagtctacctgaaggtacaataattaaagtagatttaaatgacaataaagaactt
gattttaaggttgttaaacctacgtcttaa
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