Prodigiosinella confusarubida ATCC 39006: Ser39006_015575
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Entry
Ser39006_015575 CDS
T05290
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ser39006_015575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_015575
Enzymes [BR:
sera01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Ser39006_015575
Transporters [BR:
sera02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Ser39006_015575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
RsgA_GTPase
Zeta_toxin
AAA_16
APS_kinase
DUF87
AAA_29
AAA_22
MMR_HSR1
AAA_25
Cytidylate_kin
AAA_30
AAA_15
nSTAND3
AAA_5
NB-ARC
G-alpha
Flp_Fap
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AUH05433
UniProt:
A0A2I5T9B2
LinkDB
All DBs
Position
complement(3406009..3407757)
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AA seq
582 aa
AA seq
DB search
MMNDKDLSTWQTFRRLWPMISPFKTGLIVAAVALVINAAGDTLMLSLLKPLLDEGFGKAD
RSILVWMPLVVIGLMVMRGVSGFVSSYCVAWVSGKVVMNMRRRLFSHIMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSNALITVVREGASIIGLFVLMFWYSWQLSLILIVIAPVVSY
CIRVVSKRFRAISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVEAARFDIVSNRMRQQ
GMKLVSAASISDPIVQLIASLALAFVLYAASFPSVMATLTAGTITVVFSSMIALMRPLKS
LTNVNSQFQRGMAACQTLFSILDLEQEKDTGQRTLEHVQGTIEFRNVDFAYPGKETLALK
NISLHIPPGKTVALVGRSGSGKSTIANLITRFYDIQSGEIMLDGHDLREYTLATLRSQVA
VVSQNVHLFNDTIANNIAYACNDRYSREDIERAAEMAHAMDFISKMEQGLDTIIGENGVL
LSGGQRQRIAIARALLRDCPILVLDEATSALDTESERAIQAALDELQKDRTALVIAHRLS
TIENADEILVVEEGRIVERGEHAELLSRNGAYAQLYRMQFGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgataaagatctctccacgtggcagacgtttcgtcgcctctggccgatgatc
tctccttttaaaacagggttgattgtggcggccgttgcgctggtgatcaacgccgctggc
gatacactgatgctgtcgctgctcaaaccgctgctggatgaggggtttggtaaagctgac
cgcagtattctggtatggatgccgctggtggttatcgggttgatggtcatgcgcggtgtg
tcgggctttgtttccagctactgtgtcgcctgggtttccggaaaagtagtcatgaacatg
cgtcgtcgcctgttcagccatatcatggggatgccagtttctttctttgatcagcaatcg
accggtacgctgttatctcgtatcacctatgattctgagcaggtagcttcttcatcgtcc
aacgcgctgatcacggtagtgagagaaggcgcgtcaatcatcggcttgtttgtgctgatg
ttctggtatagctggcagttgtcactgattctgatcgtgattgcccccgtcgtgtcttat
tgtattcgggtggtatccaaacgctttcgcgctatcagtaaaaacatgcagaacaccatg
gggcaggtgaccaccagtgcggaacagatgcttaaagggcataaagaagtattgattttt
ggcggacaagaagtggaggccgcgcgctttgacattgtcagcaaccgtatgcgtcaacag
ggcatgaaactggtatccgccgcttccatttctgatcccattgtgcagttgatcgcgtca
ctggcgttggcatttgtgctctatgccgccagtttcccatcggtaatggcgacgctcacc
gcaggtactatcactgtggtgttctcttccatgattgcgctgatgcgcccgctgaaatcg
ctgactaacgtcaattcccagtttcagcgtggtatggcggcttgccagaccttgttctca
attctggatttggaacaggaaaaagacactggccagcggacgctggaacatgttcaaggc
actattgaattccgtaacgtggattttgcctatccgggtaaggaaacgttggcgttgaaa
aatatcagtttgcatattccaccgggaaaaaccgtggcactggtcgggcgctctggttcg
ggtaaatccactatcgccaacctgattacccgtttttatgatattcagtccggtgaaatt
atgctggacgggcatgatctgcgtgaatataccttggctacgctgcgcagccaggtggcg
gtggtttcccaaaatgtgcatctgttcaacgacactatcgccaacaatattgcttatgcc
tgtaatgatcgctacagccgtgaagatattgagcgtgcggctgaaatggcgcacgcgatg
gattttatcagcaagatggagcaggggctggatacgatcattggcgagaatggtgtgctg
ttgtctggtggtcagcgtcagcgtatcgccatcgcccgtgcgttactgcgtgattgcccg
attctggttctggatgaagcgacctccgcgttggataccgagtcggagcgagcgattcag
gccgcactggatgaattgcagaaagatcgcacggcattggttattgcccatcgtctttcc
accattgaaaatgcggatgaaattctggtggtggaagaggggcggattgtcgagcgtggc
gaacatgctgaattactgtcacgcaacggggcatatgcccagctgtatagaatgcagttc
ggcgcatga
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