Prodigiosinella confusarubida ATCC 39006: Ser39006_019985
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Entry
Ser39006_019985 CDS
T05290
Name
(GenBank) TIGR03752 family integrating conjugative element protein
Organism
sera
Prodigiosinella confusarubida ATCC 39006
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Gene cluster
GFIT
Motif
Pfam:
TrbI
KASH_CCD
ERM_helical
ZapB
FapA
YabA
DivIVA
DUF1690
COG3_N
Ax_dynein_light
Motif
Other DBs
NCBI-ProteinID:
AUH06204
UniProt:
A0A2I5TBH1
LinkDB
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Position
complement(4395662..4397185)
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AA seq
507 aa
AA seq
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MKIKSNGLVKLMVPLAILGTVFIGVKSCSTDGGEKNAQANAGTAVPDLTPEDMKAMGIEG
DTPQDTLRTLVGSLKTVTKRQNQLDADNKALAEENKNLQQSNQNVDERIHQAVINAQSTA
DKEQSHLKGQVQALTTQIGDLMQKLKDKGNGGQGTMTGNPSTIGSDIPVGLGLDGGGVGS
AVPSTGSDGLLWVEPKDGVAVDASGKPVGEGNTNIANGFSFATSFLDDNAITRQKAELAN
KTNAGKTLSGNNAAEGPVDPVYTLPENSTLIGSRAMTALLGRVPIDGKVTDPYPFKVLIG
KDNLTANGIDLPDVQGAIVSGTATGDWTLSCVRGSVTSITFVFSDGTVRTLPRPAGQTDS
QGGNNGNNAGSIGWLSDENGIPCLSGERKSNASTYLPTLFALSASSAAGDALAQNQNTAQ
TNAYGGVTSTLTGDAGQSVLGKAVSGGMRDMADWVKARYGQTFDAIYVPPGMKVAVHITR
QLAIDYEEKGRKVKYDFSLSQAGTGLD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaatccaatggtctcgtcaaactcatggtgccgctggctatcctcggcacg
gtgttcattggtgtcaaatcttgctcaacagatggcggggagaaaaacgcgcaggccaat
gcaggaacggcagtgcctgacctgacgccggaggacatgaaggcgatgggcattgaaggg
gacacgcctcaggacaccctgcgcacgctggtcggcagtttgaagacggtgacgaagcgg
caaaaccagcttgacgccgacaacaaggctctggcggaagaaaataaaaatctgcagcag
agcaatcagaacgttgatgagcgtatccatcaggcggtgatcaatgcgcagtcaacggca
gataaagaacaaagccatctgaaaggccaggtacaagcactgactacacagattggcgac
ctcatgcagaaattgaaggataaaggcaacggcggtcagggaacgatgacaggaaatcct
tctaccatcggcagtgatatccccgtggggttggggctcgatggcggaggcgtcgggagt
gccgtgccctcaacagggagcgatggtctcctgtgggttgaacctaaagacggcgtggcg
gtagatgccagcggcaaaccggttggagaagggaataccaacattgccaacggtttttcc
tttgcaacctccttcctggatgataacgccatcacccgtcagaaagccgagctggccaat
aaaaccaatgccggcaaaaccctcagtggcaataacgccgccgagggccccgttgatccg
gtgtacaccctgcctgaaaattcaacactaattggcagccgggcgatgaccgcgttgctc
ggacgcgtccctatcgatggaaaagtcaccgacccttatcccttcaaagtgcttattggc
aaagacaacctgaccgcgaacggtatcgacctgccggatgtgcagggcgcaattgtctcc
ggcacggcgaccggtgactggacgctgtcgtgcgtgcgcggctcggtgaccagcatcacg
tttgttttttctgatggcacagtacgtaccctgccacggcctgccgggcagaccgacagc
cagggcggaaacaacggcaacaatgctggcagtattggctggctgtcagatgaaaacggt
attccctgtctctctggcgagcggaaatcgaacgcatcgacctatttgcccacactcttt
gcgctctctgccagcagcgccgctggcgatgcgctggcccagaaccaaaatactgcgcag
acgaacgcttatggtggtgtgacatcaacgctgacgggcgatgccggacagtctgtcctc
ggtaaagcggtctccggggggatgcgggatatggcggactgggtgaaagcccgttatggc
cagacctttgatgccatctatgtacccccgggcatgaaggtggcggtccatatcacccgg
cagctggcgattgattatgaagagaaaggccgcaaagtgaagtatgacttcagcctgagc
caggccggcacgggactggactga
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