Serratia sp. MYb239: CLM71_19345
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Entry
CLM71_19345 CDS
T05477
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00550
Peptidoglycan biosynthesis
serm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM71_19345 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
serm01003
]
CLM71_19345 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
CLM71_19345 (mrcB)
Enzymes [BR:
serm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CLM71_19345 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLM71_19345 (mrcB)
Glycosyltransferases [BR:
serm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CLM71_19345 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CLM71_19345 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AVJ19132
LinkDB
All DBs
Position
complement(4057424..4059937)
Genome browser
AA seq
837 aa
AA seq
DB search
MAGDDREPIGRKGKPPKRSAPRRPPRRRLDDDDDDYQANNFQDEYDDDEYNDEEERMPRK
VKAAPPRKKRRWLGLMLKIILVIAVLLAGYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNL
EPGMPYSKGEMVKLLEGMQYRQVSRMTRPGEFTVKANSIEMLRRPFDFPDGKEGQIRARL
DFQNNRLAKIENLDNQRSFGFFRLDPRLITMLQSPNGEQRLFVPRSGFPDLLVDTLIATE
DRHFYEHDGISPYSIGRAVLANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYM
ALLVDYRYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPVDELSLDQQALLVGM
VKGASLYNPWRNPKLALERRNLVLKLLQNQGVIDAELYNMLSARPLGVQPKGGVITPQPA
FMQLVRQELQSKLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEAGVPALRAARHVKDLEAA
MVIVDRFSGEVRAMVGGAEPQYAGFNRALQARRLVGSLAKPPTYLTALSEPDKYRLNTWL
ADAPLSLKQPNGSVWQPNNYDRRFRGKVMLVDALAHSLNVPTVNLGMAVGLDQISATLQR
LGIPKSEINPVPSMLLGAIGLTPMEVAQEYQTIAGGGNRAPLSAVRSVIAEDGSVLYRSF
PQAERVVPAQAAYLTLYAMQQGVARGTSRSLSVKFPNYHLAAKTGTTNDLRDSWFAGVDG
KEVAIAWVGRDNNGPAKLTGSNGALTLYRRYLENQTPLPLQLQAPEGINQMSIDSDGNFL
CGGGGWRTIPVWTDNPDGLCQASQAALQQQQQQEQQTQEEQKGSDGVAGWIKDMFGQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggccggggatgaccgcgagcccatcgggcgcaaagggaaaccacccaagcgcagcgcg
ccgcgcaggccgccgcgccgtcgtctggatgacgacgatgatgactaccaagcaaataac
tttcaggatgagtatgacgatgatgaatataacgacgaggaagaacgcatgccgcgtaag
gtaaaggccgcgccgcctcgtaagaaacgccgttggctcggcttgatgctgaaaatcata
ctggtgatcgccgtgctgctggccggttacggcgtctatctggattcgcagatccgcagc
cgcatcgacggcaaggtctggcagctgccggcggcggtgtatggccgtatggtcaacctg
gaacccggcatgccgtacagcaaaggcgaaatggtcaagctgctggaggggatgcagtac
cgccaggtcagccggatgacgcgcccgggcgagtttaccgtgaaggccaacagcattgag
atgctgcgccgtccgtttgatttccctgacggtaaagaggggcagattcgcgcccgtctc
gacttccagaataaccgtctggcgaagatcgaaaacctggataaccagcgcagcttcggc
ttcttccgcctggatccgcgcttgatcaccatgctgcagtcgccgaacggcgagcagcgt
ctgttcgtaccgcgcagcggcttccccgatctgctggtggacacgctgattgccaccgaa
gaccgccacttctacgagcatgacggcatcagcccttactcgatcggccgtgcggtgctg
gctaacctgaccgccggccgcgcggtgcagggcggcagtaccctgacccagcagctggtg
aagaacctattcctgaccaacgagcgttcgctgtggcgtaaggccaatgaagcctatatg
gcgctgctggtggactaccgttacagcaaagaccgcattctggagctgtatctgaacgag
gtgtacctcggccagagcggcagcgaccagatccgcggcttcccgctggccagcctgtat
tacttcggccgtccggtggatgagctgagcctcgaccagcaggcgctgctggtggggatg
gtgaaaggggcgtcgctgtacaacccgtggcgcaacccgaaactggcgctggagcgccgc
aacctggtgctgaagctgttgcagaaccagggcgtgattgacgcggagctgtataacatg
ctcagcgcgcgtccgctgggcgttcagccgaagggcggggtgatcacaccgcagccggcc
tttatgcagttggtgcgtcaggagttgcagagcaagctgggggacaaggtgaatgacctg
tccggcgtgaagatcttcaccactctggatccggtgtcgcaggacgcggcggagaaagcg
gtggaagccggcgtgccggcgctgcgcgctgcgcgtcacgtgaaagatctggaggcggca
atggtgatcgtcgaccgcttcagcggggaagtccgcgcgatggtcggcggtgccgaaccg
cagtacgccggctttaaccgtgcgctgcaggcccgccgtctggtggggtcgctggccaag
ccgccgacctatctgaccgcgctgtccgagccggacaagtaccgcctgaacacctggctg
gcggatgcgccgctgtcgctcaagcagccgaacggcagcgtctggcagccgaataactac
gatcgccgtttccgcggcaaggtgatgctggtggatgcgctggcgcactcgctgaacgtg
ccgacggtaaatctggggatggctgtcgggctggatcagatcagcgccacgctgcagcgc
ctgggcattccgaagtcggaaatcaatccggtgccgtccatgctgctgggggctatcggc
ctgacgccgatggaagtggcgcaggagtaccagaccattgccggcggcggcaaccgtgcg
ccgctgtctgcggtgcgttcggtgattgccgaagacggcagcgtactgtaccgcagcttc
ccgcaggcggagcgagtggtaccggcgcaggcggcctatctgacgctgtacgccatgcag
cagggtgtggcgcgcggtacctcgcgttcactgtcggtgaagttcccgaactatcatctg
gcggcgaaaaccggtaccaccaacgatctgcgcgacagctggtttgccggcgttgacggc
aaggaagtggcgatcgcctgggttgggcgcgataacaacggcccggccaagctgaccggc
tccaacggcgcgctgacgctgtatcgccgctatctggaaaaccagacgccgctgccgttg
cagctgcaggcgccggaagggatcaaccagatgagcattgattccgacggtaacttcctg
tgcggcgggggcggttggcgcaccatcccggtgtggaccgataacccggacggcctgtgt
caggccagccaggccgcgttgcagcagcaacagcaacaggaacagcagacgcaagaagag
cagaaaggctccgacggtgtcgccggctggatcaaggatatgttcggccagtaa
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