Serratia sp. SCBI: SERRSCBI_15565
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Entry
SERRSCBI_15565 CDS
T03314
Symbol
lacZ
Name
(GenBank) beta-D-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00052
Galactose metabolism
sers00511
Other glycan degradation
sers00600
Sphingolipid metabolism
sers01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SERRSCBI_15565 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
SERRSCBI_15565 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SERRSCBI_15565 (lacZ)
Enzymes [BR:
sers01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SERRSCBI_15565 (lacZ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
MdcG
Motif
Other DBs
NCBI-ProteinID:
AIM22699
LinkDB
All DBs
Position
3314471..3317560
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AA seq
1029 aa
AA seq
DB search
MPAAPLASLTEILARRDWQNPACTHYRRLETHPPFASWRTVEDARDDAPSVSRRSLNGEW
RFSYFPRPEAAPESWLQQDLPDAAPLAVPGNWQLAGYDAPIYTNVRYPFPVDPPRVPEDN
PTGCYSRAFSVDPAWLAAGQTRVIFDGVNSAFYLWCNGHWVGYSQDSRLPAEFDLSPWLR
PGENRLAVMVLRWCDGSYLEDQDMWRMSGIFRDVSLLHKPAAHLSDVRITTPLHDRFTRG
ELVVTARASRPGPLQVQIQLWRDGARVAERTQPLGSEIVDERGAYDDRVTLRLPVERPAL
WSAETPALYRATVALLSPEGEIIEVEAYDVGFRQVEISGGLLKLNGQPLLIRGVNRHEHH
PRHGQVMDEATMRHDILLMKQHNFNAVRCSHYPNHPLWYRLCDRYGLYVVDEANIETHGM
QPMNRLADDPLWLPAMSERVTRMVQRDRNHPCIIIWSLGNESGHGANHDALYRWVKSQDP
TRPVQYEGGGADTAATDIICPMYARVDQDQPFPAVPKWAIGKWIGLPEEPRPLILCEYAH
AMGNSFGGFERYWRAFHAHPRLQGGFVWDWVDQALIKRDDRGEEFWAYGGDFGDTPNDRQ
FCLNGLVFADRTPHPALFEAQRAQQLFRFAFDAASLTLTVTSDYLFRHTDNEQLNWRLEL
DGVERASGSLDLALPPQGSASFTLLDRLPMLHQPGELWLNVEVVQPQATDWSEAHHRCAW
DQWRVPRALHPAPPPAQGVPPMLIEDDEGLTLTHGDQRWRFERSSGHLTQWWQNQQPQLL
APLRDGFARAPIDNDIGVSEADHIDPNAWVERWKLAGLYRLEERCTQLQADALQNGVRVV
SEHQFGVDGQILLISRKQWLFDALGAVCVNVEVEVADALPPPARIGLNCQLATVQPQVEW
LGLGPHENYPDRRLAAQYGRWRLPLADLHTPYIFPGENGLRCDTRSLRYGGWRIDGRFHF
SLSRYGLQQLMACSHQHLLQPEAGTWLHLDGFHMGVGGDDSWSPSVHRDYLLTAGVYRYQ
LRLQRAPEG
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcgcccctagcttccctgaccgagatcctcgcccgccgtgactggcaaaac
cccgcctgcacccactaccgccggctggagacccacccgccgttcgccagctggcgcacg
gtggaagacgcgcgcgacgacgcccccagcgtcagccgccgatcgctgaacggcgagtgg
cgcttcagctatttcccgcgcccagaggccgcgccggagagctggctgcagcaggatctg
ccggacgccgccccgctggcggtgccgggcaactggcagctcgccggctacgacgcgccg
atctacaccaacgtgcgctacccgttcccggtcgatccgccgcgcgtgccggaagacaac
ccgaccggctgctactcgcgcgccttcagcgtcgatccggcctggctggccgccggccag
acgcgcgtcatcttcgacggcgtcaactcggcgttctatttatggtgcaacggccactgg
gtcggctattcgcaggacagccgcctgccggcggagttcgatctcagcccgtggctgcgg
ccgggtgaaaaccggctggcggtgatggtgctgcgctggtgcgacggcagctatctggaa
gatcaggacatgtggcgcatgagcggcatcttccgcgacgtcagcctgctgcacaaaccc
gccgcgcacctgagcgatgtgcgcatcaccacgccgctgcatgaccgctttacccgcggc
gaactggtggtgacggcgcgcgccagccggcccggcccgctgcaggtgcagattcagctg
tggcgcgacggcgcgcgagtggccgaacgcacccagccgctcggcagcgagatcgtggac
gagcgcggcgcctatgacgatcgcgtcacgttgcggctgccggtggaacgcccggcgctg
tggagcgccgaaacgcccgcgctgtatcgcgccaccgtcgccctgctctcgcccgaaggg
gagattatcgaggtggaggcctatgacgtcggcttccgccaggtagagatcagcggcggg
ctattgaagctcaacgggcagccgctgctgatccgcggcgttaaccgccacgagcatcat
ccgcgccacggccaggtgatggacgaggcgacgatgcgccacgacatcctgctgatgaag
cagcacaacttcaacgcggtgcgctgttcgcattaccccaaccacccgctgtggtaccgg
ttgtgcgaccgctacgggctgtacgtggtggacgaagccaatatcgagacccacggcatg
cagccgatgaaccgcctggctgacgatccactgtggctgccggcgatgagcgagcgcgtc
acccgcatggtgcaacgcgatcgcaaccacccttgcatcattatctggtcgctgggcaac
gagtccggccacggcgcgaaccacgacgcgctgtaccgctgggtgaaaagccaggatccg
acccgcccggtgcaatatgaaggcggcggcgccgacaccgccgccaccgacatcatctgc
ccgatgtatgcgcgagtggatcaggatcagccgttcccggcggtgcccaaatgggcgatc
ggcaagtggatcggcctgccggaggagccgcgcccgctgatcctgtgcgaatacgcccac
gcgatgggcaacagtttcggcggtttcgagcgctactggcgcgcgttccatgcacatccg
cgcctgcagggcggctttgtctgggactgggtcgatcaggcgctgatcaaacgcgacgat
cgcggcgaagagttctgggcctacggcggcgacttcggcgacacccccaacgatcgccag
ttctgcctgaacgggctggtgttcgcggatcgcaccccgcatccggcgctgttcgaagcg
cagcgggcgcagcagctgttccgcttcgccttcgacgccgcctcgctgacgctgaccgtc
accagcgattacctgttccgccacaccgacaacgaacagctcaactggcggctggagctg
gacggcgtggagcgcgccagcggcagcctcgatctggcgctgccgccgcagggcagtgct
agcttcaccctgctcgaccgcctgccgatgctgcatcagcccggcgagctgtggctgaac
gtggaagtggtgcaaccgcaggccaccgattggtctgaagcgcaccaccgctgcgcctgg
gatcagtggcgggtgccgcgcgcgctgcatcccgcgccgccgccggcgcagggcgtgccg
ccaatgctgattgaagatgatgaagggctgacgctcacccacggcgaccagcgttggcgc
ttcgagcgcagcagcggccacctgacgcagtggtggcagaaccagcagccgcagctgctg
gcgccgctgcgcgacggttttgcgcgcgcgccgatcgataacgacatcggcgtcagcgaa
gcggaccatatcgatcccaacgcctgggtcgaacgctggaagctggcgggcctgtaccgg
ctggaagagcgctgcacgcagttgcaggccgatgcgctgcaaaacggcgtgcgggtggtg
agcgaacaccagttcggcgtggacgggcagattttgctgattagccgcaagcagtggctg
ttcgacgcgctgggcgcggtgtgcgtgaacgtggaggtcgaggtggccgacgccctgccg
ccgccggcgcgcatcggcctgaactgccaactggcgacggtgcagccgcaggtggaatgg
ctgggcctgggcccgcacgagaactacccggatcgccgcctggccgcgcaatacgggcgc
tggcgcctgccgctggcggatctgcacacgccatatattttccccggcgagaatggcttg
cgctgcgacacccgcagcctgcgctacggcggctggcgcatcgacggccgcttccacttc
tcgctcagccgctacggcctgcaacagctgatggcctgcagccaccagcatctgctgcag
ccggaagcaggcacctggctgcatctggacggcttccacatgggggtgggtggcgacgat
tcctggagcccgagcgtgcaccgggattacctgctcaccgccggcgtttaccgctatcag
ctgcgcttgcagcgagcgcccgagggctaa
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