Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_05615
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Entry
STU288_05615 CDS
T02639
Symbol
yebU
Name
(GenBank) rRNA (cytosine-C(5)-)-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setu03009
]
STU288_05615 (yebU)
Enzymes [BR:
setu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
STU288_05615 (yebU)
Ribosome biogenesis [BR:
setu03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
STU288_05615 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AGK08731
LinkDB
All DBs
Position
1163229..1164821
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AA seq
530 aa
AA seq
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MGHRSATLNTRLRRTRAGAFYATLRACFFAGDTPVAQHAVYFPDAFLTQMREAMPSTLSF
DEFISACQRPLRRSIRINTLKISVADFLALIAPYGWSLTPIPWCHEGFWIERDDEEALPL
GSTAEHLSGLFYIQEASSMLPVAALFADDNHPQRVMDMAAAPGSKTTQIAARMGNRGAIL
ANEFSASRVKVLHANISRCGIANTALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKD
PDALKNWSPESNLDIAATQRELLDSAFHALRPGGTLVYSTCTLNRQENEAVCLWLKETYA
DAVEFLPLGDLFPDADRALTPEGFLHVFPQIYDCEGFFVARLRKMSSLPAMPAPGYKVGA
FPFTPLKGREALHVTQAANAVGLLWDENLHLWQREKEVWLFPAEIESLIGKVRFSRLGIK
LAESHNKGYRWQHEATIALACPTHAHAFELSVQEAEEWYRGRDIYPQTPPAADDVLVTFQ
HQPLGLAKRIGARIKNSYPRELVRDGKLFTGNSQKAHKKTALFDWRFCLR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggggcaccgctctgccacgttaaacaccaggctccggcgtactcgcgccggagcgttt
tatgctacactgcgcgcctgtttttttgccggcgatacacctgtggctcaacacgctgtc
tattttcctgacgcttttctgacgcaaatgcgtgaagcaatgccttccacgctctctttt
gatgaatttatttcggcctgccaacgcccgttgcgccgcagtatacgcatcaatacgctt
aaaatatccgtggctgatttccttgccctaatcgcgccctacggctggtcgctcacgcca
attccgtggtgtcatgaaggattctggatcgagcgcgatgatgaagaggcattgccgctt
ggcagtaccgctgagcatttaagcggcctgttttacattcaggaggccagttcgatgctg
ccggtcgcggccctgttcgccgatgataatcatccgcagcgggtcatggatatggcagcg
gcgcctggctccaaaaccacgcagatcgctgcccgcatggggaaccgcggcgccattctg
gccaacgaattttcggccagccgcgtcaaagttctgcacgctaatatcagccgatgtgga
atcgccaataccgcactgacgcatttcgatggccgcgtatttggcgctgcgttaccggag
atgtttgacgctatcctgctggatgcgccctgctctggcgaaggcgtagtacgtaaagat
cctgatgcgctaaaaaactggtcgccagaaagcaatctggatatcgcggcgacacagcgg
gaactgctcgacagcgcttttcatgctttacgacccggcggcacgctggtctactccacc
tgcacgttaaatcgccaggaaaacgaagcggtctgcctctggctgaaagagacctacgcc
gacgccgttgaatttttgccgctgggtgatctgtttcctgacgctgaccgcgccctcacc
ccggaaggcttcctgcacgtcttcccgcaaatttacgactgcgaaggattcttcgtcgca
cgtctgcgtaaaatgtcatcccttccagccatgcccgcgccggggtataaagtgggggcg
tttccttttacccccctcaaaggccgcgaagcattacacgttacccaggcggccaacgcc
gtcggactgttatgggatgaaaatctccatctttggcagcgtgaaaaagaggtctggctg
ttcccggcagagattgaatcactgatcggaaaagtccgtttttcccggctcggcattaag
ctggccgaaagtcataataaaggctatcgctggcaacatgaggcgacgatagcccttgcc
tgcccgactcatgctcacgcgttcgaactttctgtgcaagaggcggaggagtggtatcgc
ggtcgggatatttatccgcaaacaccccctgccgctgatgatgtcctggtgacgttccag
catcagccacttggtctggcaaaacgtatcggcgccagaataaagaacagttacccgcgt
gaactggtacgtgatggcaaactctttactggtaatagtcaaaaggcgcacaaaaaaacc
gcactttttgactggcgcttttgcctacgttga
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