Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_14125
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Entry
STU288_14125 CDS
T02639
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00250
Alanine, aspartate and glutamate metabolism
setu00310
Lysine degradation
setu00350
Tyrosine metabolism
setu00650
Butanoate metabolism
setu00760
Nicotinate and nicotinamide metabolism
setu01100
Metabolic pathways
setu01120
Microbial metabolism in diverse environments
Module
setu_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
STU288_14125 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
STU288_14125 (gabD)
00310 Lysine degradation
STU288_14125 (gabD)
00350 Tyrosine metabolism
STU288_14125 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
STU288_14125 (gabD)
Enzymes [BR:
setu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
STU288_14125 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
STU288_14125 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
STU288_14125 (gabD)
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Motif
Pfam:
Aldedh
TilS
Motif
Other DBs
NCBI-ProteinID:
AGK10425
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Position
2938052..2939500
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AA seq
482 aa
AA seq
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MQLNDSTLFRQQAFIDGDWRDARGGDVIPVSNPANGKPLGNVPKMGAEETRDAINAANRA
LPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAQRAGIPAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLNQAVNKLAVGDGLQADVAIGPLIDEKAVAKVQEHIADALEKGARVITGGEA
HKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDEADVIRQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaacgactctaccctgttccgccagcaggcctttatcgatggcgactggcgc
gacgcgcgcggcggcgatgtcatccccgtgagcaaccccgccaacgggaaaccgcttggc
aatgtgcccaaaatgggggcggaagagacgcgcgacgccatcaacgccgccaatcgcgcc
ctgcccgcctggcgcgcgctcaccgccaaagagcgagccaatatcctgcgtcgctggttc
aatctgatgatggaacatcaggacgatttggcgcgtctgatgacgctggaacagggtaaa
ccgctggcggaagcgaaaggcgaaattagctacgccgcctcgtttattgaatggttcgcc
gaagaggggaagcgtatctatggcgacacgattccaggccatcaggccgataaacggctg
ctggtgattaaacagcccatcggcgtcaccgccgcgattaccccgtggaactttccctcg
gcaatgatcacccgtaaagccggccccgcgctggccgcaggctgcacaatggtactcaaa
cccgccagccagacgccgttttccgcgctggcgctggcggaactggcccagcgcgccgga
attcccgcaggcgtatttaacgtcgttaccggttcggcaggcgatatcggcggcgagctg
accagcaacccgctggtacgcaaactgtcgtttaccggctcgacggagattggccgccag
ctaatggaacaatgcgccaaagacattaaaaaagtgtcactggaattgggcggcaatgcg
ccgtttatcgtctttgacgatgccgatctggataaagccgtcgaaggcgcgctggcttcg
aagtttcgcaacgccgggcagacctgtgtctgcgccaatagattgtatgttcaggacggc
gtttacgatcgttttgcggaaaaactcaaccaggcggtaaataagctcgcggtcggtgac
ggcctgcaagccgacgtcgctatcgggccgctgattgatgaaaaagccgtggcgaaagtc
caggaacatatcgccgatgcgctggaaaaaggcgcccgcgtcattacgggcggtgaagcg
cacaaattgggcggcaacttctttcaaccgaccattctggcggatgttcctgataacgcg
aaagtcgccaaagaagagacattcgggccgctcgcgcctctgttccgcttcagcgacgag
gcggacgtcatcaggcaggctaacgataccgagttcggcctggcagcctatttttatgca
cgcgatttaagccgcgttttccgcgtcggcgaagcgctggaatacggcatcgtcggtatt
aataccggcattatctccaacgaagtcgcgcctttcggcggcattaaggcctccggatta
ggccgagaaggttccaaatacggcatcgaagattatttagaaatcaaatatatgtgcatc
ggcctttaa
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