Saccharomyces eubayanus: DI49_1409
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Entry
DI49_1409 CDS
T08138
Name
(RefSeq) PRP22-like protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
seub
Saccharomyces eubayanus
Pathway
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_1409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
seub03041
]
DI49_1409
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DI49_1409
Spliceosome [BR:
seub03041
]
Complex C
Other components
Step II factors
DI49_1409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
AAA_22
DEAD
PWI
ABC_tran
nSTAND3
AAA_14
AAA_19
AAA_30
SRP54
AAA_7
T2SSE
Sigma54_activ_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
28930546
NCBI-ProteinID:
XP_018222676
UniProt:
A0A0L8RKE6
LinkDB
All DBs
Position
V:180866..184309
Genome browser
AA seq
1147 aa
AA seq
DB search
MSDVSKTIASIVGSDDPVIIEFILNIMNRSKNLQEFIQNIQGLEAGISYEDSTKLYNVFS
KNDKNEKSPDIVIDSGLSREVHQILKDDVNLDDPVVTDFVLSILNESKSITEFQEKLSSM
QSGLDNETIFKIYQIVSPPIAKEEAPKTKIAIKAEAKVSQEAEEKERKTDDLDLNPVLDK
VYRGRVRNITAFGCFVQILGTQRKNCDGLVHISEMXKQRIRDPHDLVKQGQHVFVKVIKV
QNNGKISLSMKGVDQDNGEMEETNDTEVESRGRPNDIQTGRPAKNKIKRRALTSPERWEI
RQLIASGAASIDDYPELKEEIPRNTSYIMEEENKVATPSNEKNSEGVKPEVKEEEEQIDE
IDVELNTDDEPKFLKDQQVKGARKYEMPKITKVPRGSMNRTAMNGSNAVRDHREEKMKKK
REIEQKIRKKQSFDDPTKNKQDSRNEIQTLRNQLVVTEWERNRMNEPISYGKRTSMPISV
QRQTLPVYAMRSELMQAVRENQFLVIVGETGSGKTTQITQYLDEEGFSNYXMIGCTQPRR
VAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYS
VIMLDEAHERTVATDVLFALLKKAVVKRPELKVIVTSATLNSAKFSEYFLNCPIIKIPGK
TFPVEVLYSQTPQMDYIEAALDCVIDIHINEGQGDILVFLTGQEEIDSCCEILFDRVKTL
GDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVLATNIAETSITIDGIYYVVDPGFA
KINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEI
QRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLHALTELYHLQSLDDEGNLTRLGREM
SLFPMDPTLSRSLLSSVDQQCSDEIVTIISMLSVQNVFYRPKDKQLEADHKKARFHHPYG
DHLTLLNVYTRWQQADYSEQYCKTNFLHFRHLRRARDVKSQISMIFKKSGLRLISCHSDP
DLIRKTLVSGFFMNAAKRDSQVGYKTINGDTEVGIHPSSSLYGKEYEYVIYHSLVLTSRE
YMSQITSIEPQWLLEVAPHFYKATDAESQSRKRAKIIPLHNKFAKDQNSWRLSSIRQSRE
RALGIKR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgtttcgaaaaccatagcttctattgtagggtccgatgaccctgtgatcatt
gaattcatactaaatatcatgaatagatcaaaaaatttgcaagagttcatacaaaatatt
caaggcttagaagccggcatatcttacgaagacagtactaaattgtataatgtattttca
aaaaatgacaagaatgaaaagagcccagacattgttatagattcagggttaagtcgcgaa
gttcatcaaatcttaaaggatgacgttaatttggacgaccctgtagtgactgatttcgta
cttagcattttaaatgaatccaagtcaataaccgaatttcaagaaaaactaagctccatg
caaagcggtctcgataatgaaacaatctttaaaatatatcaaatcgtatccccgcctata
gcgaaagaagaagctccaaaaaccaagattgcaataaaagcagaagcaaaagtgagccaa
gaggcagaagaaaaagagcggaaaacagacgatttagaccttaatcctgttcttgataaa
gtatatcgtggtagagtgagaaatataaccgcttttggttgttttgttcaaatcttgggg
acacaaaggaagaactgcgatgggttggttcatatatcggaaatgtyaaaacaaagaata
agggatccacatgatttagtgaaacaaggtcaacacgtgtttgttaaagtaataaaagta
caaaataatggaaaaatatcgctctcgatgaaaggcgttgatcaagataatggagaaatg
gaggaaacaaatgatacagaggttgaaagtagaggtagacctaacgatattcaaacaggt
agaccggcaaaaaataagattaaaaggcgtgcgttaacttcacctgaaagatgggagatt
cgacaactcattgctagtggtgctgcttctatcgacgattatccagaactaaaggaggaa
atccccagaaatacttcctatataatggaagaggagaataaagtagcaacaccttctaac
gaaaaaaattctgagggtgtgaaaccagaagtaaaggaggaagaggaacagatagacgag
attgatgtcgagctgaatacagatgatgaacctaaattcctgaaagatcaacaagttaag
ggtgccagaaaatatgaaatgcctaaaataacaaaagttccaagaggatccatgaatcgt
acagcaatgaatggttcgaatgctgtaagagatcacagagaagaaaaaatgaagaaaaaa
agagagattgaacaaaaaataagaaaaaaacaatcatttgacgatcctacgaagaacaaa
caagattccaggaatgaaatccaaacgttgagaaaccaattggttgttactgaatgggaa
aggaacagaatgaatgaacctatttcctacgggaaaagaacctccatgccaatcagcgta
caacgtcaaacattacctgtatacgcaatgagatccgaattaatgcaggctgttcgcgaa
aatcagtttttagtcattgttggtgaaacaggttcgggtaaaaccactcaaatcacacaa
tatttagacgaagaagggttcagcaattatgrgatgattggatgtactcaacctcgtagg
gttgctgctgtctctgtagcaaaaagagtcgctgaagaagttggctgtaaagttggtcat
gatgttggttacactattagatttgaagatgttactggcccagatacgagaataaaatat
atgactgatggtatgttacagagagaagcattgttagaccctgagatgtcaaaatattct
gttataatgttagatgaagctcatgaaagaaccgtggcaacagacgttttatttgcattg
ttgaagaaagctgtggtcaagagaccagaattaaaagtgatagttacatcggcaactttg
aactctgctaagttttctgagtattttttgaattgtccgattattaagatacctggtaaa
acgtttcctgtagaggtgctttactcacaaaccccccaaatggattatatagaggccgca
ttggattgtgttatagacattcatataaatgaaggccaaggtgatattttggtttttttg
acagggcaagaagaaattgactcatgctgtgaaatactttttgatagagtaaagacgtta
ggcgatagtattggcgagttacttattctacctgtctactctgccttgccaagtgaaatt
caatcaaaaattttcgaacccactccgaagggcagtagaaaagttgtgcttgctacaaat
attgctgaaacttctattactattgacggtatctattacgttgttgaccctggttttgcg
aagattaacatctataacgctagagcaggtattgaacaactgatagtatctccaatatca
caagcacaggcaaaccaaagaaagggtagagctgggagaacaggtccaggtaaatgttat
cgactatacacagaatccgcattttacaatgaaatgctagaaaatactgttcccgaaatt
caaagacagaatctttctcatactattttaatgctaaaggccatgggcatcaacgacttg
ctaaaatttgatttcatggatccaccaccgaagaatttaatgctgcatgcactaacagaa
ttatatcatttacagtcattagacgacgagggaaatttgacgagactaggtagagaaatg
tccttgtttccaatggatcccactttatcacgctccctgttatcatctgtggatcagcaa
tgttccgatgaaatcgttactataatctcaatgttatcggtacagaatgttttttaccgt
ccgaaagataaacagctggaagctgatcataaaaaggcaagattccatcacccatatggt
gaccacctgacgttattgaacgtttacacgagatggcagcaagcagattactcagaacaa
tactgtaaaacaaactttttacactttaggcatttgagaagagccagagatgtcaaaagt
cagatcagcatgatttttaaaaaatcgggtctaagattaattagctgtcatagcgatccc
gatttgattcgtaaaactttagtatcagggttctttatgaatgctgctaagcgagattcg
caagtgggttataagactatcaacggtgacacagaagtaggaatacatccttcaagttcg
ttgtatgggaaagaatatgaatacgtgatttaccatagtcttgtattgactagtagggaa
tacatgtctcaaataacaagcatcgaacctcaatggcttcttgaggttgcgcctcatttt
tataaagctacagatgctgaaagtcaatctaggaaaagagccaaaataattcctttacac
aacaaatttgcgaaggatcaaaattcatggagactaagttcaataagacaatctagggaa
agagcattaggtatcaagagataa
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integrated database retrieval system
