Saccharomyces eubayanus: DI49_2119
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Entry
DI49_2119 CDS
T08138
Name
(RefSeq) PTI1-like protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
seub
Saccharomyces eubayanus
Pathway
seub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DI49_2119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_2119
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DI49_2119
U7-dependent histone pre-mRNA processing factors
DI49_2119
BRITE hierarchy
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GFIT
Motif
Pfam:
CSTF2_hinge
CSTF_C
RRM_1
MarR
Motif
Other DBs
NCBI-GeneID:
28931256
NCBI-ProteinID:
XP_018222362
UniProt:
A0A0L8RJI6
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Position
VII:773800..775083
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AA seq
427 aa
AA seq
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MTDPRRRTGRHFLTPENLSSTIQITSLPPEWNQDIITSVVAGSGPIIDIKPKNDPRTGKL
TGVLFDYLTSKDCKRAWETLNRIENFPVKIEQIIPSNYKEHLKEAASNNNNINNINSQKQ
VLQLNRDSYPFEAGLELPFEMVTEVPIPRRPPPPQALNNTNSASNNTNIQFPDILSKASK
HLPTFQDGSITAPDKISQNLSKIPPLQLIEIISNLKILSNQENIQKSQLESFLNTNNDIT
ISVTQALLEMGFIDYSVVTKVLKSQTSEVPSMLSSNNTSNSNTPMGGIRNNTPLHVSSND
VNNHANNMPVNMGMPMPMATPPFIPPPLQQQPFGFMPPGPFMPPTQGSVPMNQPSLVQQQ
SINTAEAPSGASKDSSNGTINIAKLQLLPENQQDMIKQVLTLTPVQIQSLPSDQQLMVEN
FRKEYIL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcccagaagaagaacaggtcgtcacttcttgacaccagaaaatttatcgtct
acgatacagatcacaagcttacccccagaatggaaccaagatataattacatcggtcgtg
gcaggttctggtccaattatagatataaaacctaagaatgatccgagaactggtaaactt
accggtgtgctgttcgactatctgactagtaaagactgtaaacgtgcttgggaaacttta
aatagaattgaaaattttcccgtaaagatagaacaaataattccttcaaactataaagag
catcttaaagaagcagcaagtaataataataatatcaataatattaatagtcaaaagcaa
gtgttacagcttaatagagactcttatccctttgaagcgggattagaattgccattcgaa
atggtgacagaggtccctattcctaggcgaccaccaccaccgcaagctttgaacaatacc
aattccgcttcaaacaacacaaatattcaatttcctgatatattaagtaaagcatccaaa
cacttgccaactttccaagatggctcaattactgctccagataaaatttcgcaaaattta
agcaaaattccgccattacaacttattgaaatcatatcaaatttgaaaatcctatctaat
caagagaatatccagaaatcgcaattggaatccttcttgaacaccaacaacgatatcacc
atatctgtgacacaagccctattggaaatggggttcatagattacagcgtggtaacaaaa
gtgttgaagtctcaaactagtgaggttccatcgatgctttcaagtaacaatacaagcaat
tcaaacacccctatgggcggaatcagaaacaatactccgctgcacgtttcgtccaatgac
gtcaataaccacgccaacaatatgccagtgaacatgggtatgccaatgcccatggcaaca
cctccatttattcctccccctttacaacagcagccgtttggctttatgccaccaggaccg
ttcatgcctccaactcaaggctctgtgcccatgaaccaaccctcgttggttcagcaacaa
agtataaacactgcagaagcgccatccggagcaagcaaggatagttccaatggaaccatc
aatattgcgaaactgcagctgctacccgaaaaccaacaagacatgatcaaacaagttctt
actttgacgcctgtccagatccaaagtttaccaagtgaccagcaacttatggtggaaaac
tttagaaaggaatatatactctaa
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