Sulfitobacter faviae: PL335_09640
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Entry
PL335_09640 CDS
T08789
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sfav
Sulfitobacter faviae
Pathway
sfav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PL335_09640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfav03400
]
PL335_09640
Enzymes [BR:
sfav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PL335_09640
DNA repair and recombination proteins [BR:
sfav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PL335_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
WCE65664
LinkDB
All DBs
Position
1949522..1950952
Genome browser
AA seq
476 aa
AA seq
DB search
MHRVSLPPIGTAKAWREAARGFLAAGVPPEQILWGDHAAAPDLFGGESAPVATGHVAVPR
SFVSMAETAVWHSDPERFARLYAFLWRVKDAPHLMADRGDADLAVLRGMEKNVRRCQHKM
KAFVRFREIGDPNAPRRSFAAWFEPTHHTVEPTADFFVRRFSDMDWRILTPDVSAIFEGG
KLSFQEGHAKPDLPEDAGEQLWITYFQNIFNPARLMVKAMQSEMPKKYWKNMPEAAFIPQ
MIAEAPARARAMAEAAPTLPPARMDRVQAQLSAFSSAWDGPMEELPAAIRACARCPLHCH
ATQAVPGEGSRHADLMVVGEQPGDQEDLAGRPFVGPAGQMFDRIAGEAGLDRDAAFVTNA
VKHFKFTARGKRRIHQRPETPEIDQCRWWMNAEVAQVQPKLILAMGATAAQSLTGKGAGI
LKRRGTIEAGPEGIPVLITLHPSYLLRVPDPALREEAEAQFRSDLAMAARMMAEAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcgtctccctgcccccgatcggcaccgccaaggcatggcgcgaggctgcgcgc
ggctttctggccgcgggcgtgccgcccgagcagatcctctggggcgatcatgccgcggct
cccgaccttttcggcggggagtccgcgcccgtggccacgggccacgtcgcggtgccgcgc
agcttcgtgtcgatggccgagacggcggtctggcacagcgacccggagcgtttcgcgcgg
ctttatgccttcctctggcgcgtgaaggacgcgccgcatctaatggccgaccggggcgat
gccgacctcgccgtcttgcgcgggatggagaagaacgtccgccgctgccagcataagatg
aaggccttcgtccgcttccgcgagattggcgatccgaacgccccgcgccgcagcttcgcc
gcgtggttcgagcccacgcatcacacggttgagcccacggcggatttcttcgtgcggcgg
ttttccgacatggactggcgcattctcacgcccgacgtctcggccatcttcgagggcggc
aagctcagctttcaagaaggccacgccaagcctgacctgcccgaggacgcgggcgagcag
ttgtggatcacctacttccagaacatcttcaaccccgcccgcctgatggtgaaggcgatg
cagtcggagatgcccaagaaatactggaagaacatgcccgaggccgccttcattccccag
atgatcgccgaggccccggcccgcgcccgggccatggccgaggccgcccccaccctgccg
cccgcgcgcatggaccgggtgcaggcgcagctttcggccttctcatctgcttgggacggt
ccaatggaagagcttcccgccgcgatccgcgcctgcgcccgctgtccgctgcattgccac
gccacgcaggccgtgccgggtgaagggtcgaggcatgccgatctcatggtcgtgggcgaa
cagcccggcgatcaagaagacctcgcgggccgccccttcgtcgggccggcggggcagatg
ttcgaccgcatcgccggcgaagcggggctggaccgagacgctgccttcgtcaccaatgcg
gtcaaacacttcaagttcaccgcccgcggcaaacgccgcattcaccagcgccccgagacg
ccggagatcgaccagtgccgctggtggatgaacgccgaggtggcgcaggttcaaccgaaa
ctcatcctcgccatgggcgccacggcggcgcaaagcctgaccggcaagggcgcgggcatc
ctgaaacgccgcggcacgatcgaggcggggccggagggcattccggtgctgatcaccctg
cacccctcctacctcttgcgcgtccccgaccccgcattgcgcgaggaggcggaggcgcag
ttccgctcggacctcgcgatggcggcgcggatgatggccgaggcggcctag
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