Sinorhizobium fredii USDA 257: USDA257_c03740
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Entry
USDA257_c03740 CDS
T02188
Symbol
pdhS
Name
(GenBank) cell-division control histidine kinase PdhS
Organism
sfd
Sinorhizobium fredii USDA 257
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS
PAS_9
PAS_4
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AFL48972
UniProt:
I3WZB6
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Position
complement(413581..417042)
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AA seq
1153 aa
AA seq
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MRLKGARRRRDPSIGLPMPARQYPFIDIAVHARVREHFARGDASVLFSKDLARVLWANDQ
GARLFGVASVYDFIDSPLNANDLSLRQLGAAAAQLAAVGDRRQLLIRIAAGFRRLPLNAT
VEMIRIRPGEDAVLFTAPHNGKALSAEERAAAMIAGLDGPDTHMAVLDDDGDIVARSPGF
EHLGLSAEIRRTLVSAVTREKDRLIKRLVATEKGQLPAAIGKISDHPALHLLFAVETTLE
APDAGETIAKDEPDAVDAPAFAEIETGPDAPSPDEPAETPRVEDAVEDSGTPSTTERAEA
EEPADAAPIDEKQGELTLQSGDETAEPPQTTIAETLESVQETAASDAEQDTAAASGFTFT
PGSRAVRFVWKIDAEGRFSEISEEFASAVGPKSADVVGTTFAALADRYDLDPDHKINELL
HRRDTWSGKTILWPIEGTSLKVPVDLAALPTYSRSREFDGFRGFGIVRIADAVEDARASG
LSLGDTGTPRREDMPAEAPVEPAPEGPAAIQDETEAESSPAADAPQSEPEDGATGELSTA
EDPFAGERPALRIVDTAARPPSDKVIALDERRPAGSGALTRGEQAAFREIARQLGAHFDE
PAASAAGEDDERSAGPAPPAEAAASPAADNPSPDEAIADPLEDTGPAVEDEAPPVPRSGV
SMSSEILDRLPVALLIHYGDELLHVNPEFLRLTGYATLDVFEQEGGLEALFAYGNTSGET
QPDGTMTLVRANGQLAPVSAHLHSIQWEGRSTLMLALTPAATGAANTASPDADASAGAEA
RLRMEIDELRSILETATDGVVVLGQDGDIRTMNRSASALFNYDEDEMRGKPFAALFAHES
QKAVIDYLHGLSGHGVASVLNDGREVIGREAGGGFIPLFMTIGRLSSSHGYCAVIRDITQ
WKRTEEELRNAKRAAETANAHKTDFLARVSHEIRTPLNAIIGFSDMMASEHFGPIGNPRY
IEYAGDIGRSGRHVLDIVNDLLDISKIEAGEMELDFSAVDLNEAVSEAVSLVQPQANSQR
VIIRTSLSASVPEVVADGRSIKQIALNILANAIRFTPSGGQIVVSTSYEANGSVILRIRD
MGIGMTRSELDQAMKPFRQVTTGGRKRGEGTGLGLPLTKAMAEANRAQFAISSAPNEGTL
VEISFPSQRVLAN
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcaaaggcgcacggcgccgtagggacccgtcaataggcctgcccatgcccgcg
agacagtaccctttcattgacattgccgtgcatgcacgggtgcgggagcattttgcccgc
ggcgatgcgtcggttctcttttcgaaggatctggcgcgcgtcctgtgggcaaatgatcag
ggcgccaggctgttcggcgtcgcgtcggtctacgatttcatcgatagccccttgaacgcg
aacgacctctcgctgcgccagttgggtgccgctgcagcgcagcttgccgctgtcggcgac
cgtcgccaactgctgatccggattgcggccggcttccgcaggctgccgctcaacgcgacg
gtggagatgatccgcatccggccgggcgaggacgccgttctcttcaccgctccgcataac
ggcaaggcactttcggcggaggaacgcgcggccgcgatgatcgccggcttggacgggccg
gacacgcatatggccgtgctcgacgacgacggcgacatcgtcgcccgttcgcccggattc
gagcatttggggttgtcggccgaaatccggcggacgctcgtctcggcggtgacgcgcgaa
aaggaccggctgatcaagcgcctcgtggcgaccgagaaggggcaattgcccgccgccatc
ggcaagatttccgaccacccggccctccatcttctctttgccgtggaaaccacgctcgaa
gcgccggatgccggagagaccatcgcgaaggacgagccggacgcagtcgatgcgccagca
ttcgctgagatcgagacggggccagatgcgccttcgccggacgagcctgccgaaaccccg
agggtcgaagatgcggtggaagattcggggaccccgtcgacgactgaacgagccgaagcc
gaagagccggccgatgcggcgccaatcgacgagaaacagggcgaattgactctgcagtcc
ggcgacgagacggcagaaccgccgcagacgactatcgcagagaccctcgagtccgtgcag
gaaacggcagcatcggacgccgagcaggacacagcagcggcttcgggctttaccttcacg
ccgggtagccgggccgtccgcttcgtatggaaaatcgacgctgagggacgcttcagtgag
atctccgaggaattcgcttcggccgttggcccgaaatcggccgacgtggtcggaacgacc
ttcgccgcgcttgcggaccgctacgatctcgaccccgaccacaagatcaacgagcttctg
catcgccgcgacacctggtccggcaagaccatcctgtggccgatcgaggggacgagcctc
aaggtcccggtcgacctcgccgccctgccgacctattcccgttcgcgcgagttcgacggc
ttccgcggcttcggcatcgtgaggatcgccgatgcggttgaggacgcaagggcaagtggg
ctgtcgctcggcgataccgggacaccccggcgcgaggacatgccggccgaagcaccggtg
gaacccgctcccgagggaccggccgcgatccaggatgagacggaagcggaatcttccccc
gctgccgatgccccgcagagtgagcccgaagacggcgctacgggagaactttcaacggcg
gaagacccgtttgccggcgagcggccggcccttcgcattgtcgacacggccgcgcggccg
ccctccgacaaggtcatcgctctcgacgagcgccggcccgcgggttccggggcgctgacg
cgcggcgagcaggcggccttccgcgagatcgcgcggcagctcggcgcacatttcgacgag
cctgccgcgagtgcggcaggcgaggacgacgagcgctcggcgggccccgcgcctccggcc
gaagccgccgcctcccccgccgcagacaacccatcaccggacgaggcaattgccgacccg
ctagaggacacggggcccgcggtcgaggacgaggcgccccctgtcccgcgcagcggcgtc
agcatgagcagcgaaatcctcgaccggctgcctgtcgcgctcctcattcactatggggac
gaactgctgcacgtcaatccggaatttctgcggctgaccggctacgcgactctcgatgtc
ttcgagcaggaaggagggttggaagccctcttcgcctatggcaacacatccggagagaca
cagccggacgggacgatgacgctggtccgcgccaatggccagcttgcaccggtcagcgcc
catctccattcgatccagtgggaagggcggagcacgctcatgctggcgctcactcccgcg
gcgacaggcgcagctaatacggcttcgcccgacgcggacgcctcggcgggagccgaagcg
cggctgcggatggaaatcgacgaactgcgctcgatcctcgaaaccgccaccgacggcgtg
gtggtcctcgggcaggacggtgacattcgcacgatgaaccgctcggcaagcgcgcttttc
aactatgacgaagacgagatgcgcggaaagccgtttgccgcgctcttcgcccatgagagc
cagaaggcggtgatcgactacctccacggcctttccggccatggtgtcgcaagcgtgctc
aacgatggccgggaagtgatcggccgggaggcgggaggcggcttcattccgctgttcatg
accatcgggcggctctcctcctcccacggctattgcgccgtcatccgcgacatcacccag
tggaagcggaccgaggaggaactgcgcaacgccaagcgtgccgccgagaccgcgaacgcc
cacaagaccgacttcctcgcaagggtgagccacgagatccgcacgccgctcaacgccatc
atcggcttttccgacatgatggcgagcgagcatttcgggccgatcggtaatccccgctac
atcgaatatgccggcgacatcggccggtcggggcggcacgtgctcgacatcgtcaacgac
ctgctcgacatttcgaagatcgaggcgggcgagatggagctcgatttcagcgccgtcgac
ctcaacgaggcggtctccgaggcggtatcgctggtgcagccgcaagccaacagccagcgc
gtaatcatccgcacctcgctctccgcctcggtgccggaggtcgtcgccgacggccggtcg
atcaagcagatcgcgctcaacatcctggcgaacgccatccgcttcacgccgtccggcggg
cagatcgtcgtgtcgacgtcctacgaggcgaacggcagcgtcatcctcaggatccgcgac
atggggatcggcatgacgcgcagcgaactcgatcaggcgatgaagccgttcaggcaggtg
acgaccggcggccgcaagcgtggcgagggcaccggtctcgggctgccgctgaccaaggcg
atggccgaggcgaaccgcgcccaattcgccatcagctccgcgccgaacgaagggacgctc
gtggaaatatccttcccgtcgcaacgcgtcttggcgaactga
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