Sinorhizobium fredii USDA 257: USDA257_c10560
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Entry
USDA257_c10560 CDS
T02188
Symbol
gabD2
Name
(GenBank) putative succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00250
Alanine, aspartate and glutamate metabolism
sfd00310
Lysine degradation
sfd00350
Tyrosine metabolism
sfd00650
Butanoate metabolism
sfd00760
Nicotinate and nicotinamide metabolism
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
USDA257_c10560 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
USDA257_c10560 (gabD2)
00310 Lysine degradation
USDA257_c10560 (gabD2)
00350 Tyrosine metabolism
USDA257_c10560 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
USDA257_c10560 (gabD2)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
USDA257_c10560 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
USDA257_c10560 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
USDA257_c10560 (gabD2)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AFL49647
UniProt:
I3X191
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Position
complement(1107802..1109277)
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AA seq
491 aa
AA seq
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MALTSALTKHLRAADQFARLDRVTRSSGKWEGPSFDVFNPSTGELLATLPDMGVEDAQVA
IDAAATAQPIWAGKPAKDRSAILRRWHDLIVEHVDDLAAILTAEMGKPLGEAMGEVLHAA
SYIEWYAEEAKRVYGETFPAPANDRRMLVIKQPVGVVGTITPWNFPASMVARKISPALAA
GCAIVLKPAEQTPLVAGAMFVLAEKAGFPEGVLNLLYASEGAPIGRELCSNPKVRKISFT
GSTEVGRLLMRQCSDQIKKVSLELGGNAPFIVFDDADIGEAVDGAIQAKFRNAGQTCVSA
NRIYVQSAVHDVFAEKFVARVRELRVGDGFSAGATIGPMIDGHAIEKIEAHVADALAKGA
ELRCGGERIGTNGTFFEPTVLTGISHDMRVAQEETFGPIAPIIRFETAEQVVTEANDTIY
GLAAYFYAENLKRVWHVAEALEYGMVGINTGRMSSEAAPFGGIKQSGIGREGSRHGLEDY
LEMKYLCMGNI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggccctgacatccgcattgacgaaacaccttcgcgcagcggaccagttcgcccgcctc
gatcgtgtcactcgttcctccgggaagtgggaaggcccgtctttcgacgtcttcaatcct
tcgaccggtgaattgctggcgacgcttcctgacatgggggtcgaagacgcgcaggtcgcg
atcgatgcggccgcaacggcccagccaatctgggcaggaaagcccgccaaggatcgaagc
gcgatcctgcgccgctggcacgacctgatcgtcgagcatgtcgacgatctcgccgccatt
ctgacggcggagatgggcaagccgctcggcgaggcgatgggcgaggtcctgcatgcagcc
tcctatatcgagtggtacgccgaagaggcgaaacgcgtctatggcgagacgttcccggct
cctgccaatgaccgccgcatgctcgtcatcaagcagccggtcggcgtggttggtaccatc
acgccctggaatttccctgcttcgatggtcgcccgcaagatttcgccggcgctcgccgcc
ggctgcgccattgtcctgaagcctgcggaacagacgccgctggtcgccggtgcgatgttc
gtgcttgccgaaaaggccggcttccccgagggcgtccttaatctgctctacgcgtccgag
ggcgcgccgatcgggcgcgaactctgcagcaaccccaaggtccgcaagatcagcttcacc
ggctcgaccgaagtcggccggctgttgatgcggcaatgctccgaccagatcaagaaggtt
agcctcgaactcggcggcaatgcccccttcatcgtctttgacgatgcggacattggcgag
gcggtggacggcgcgatccaggcgaagttccgcaacgccggccagacctgcgtctcggca
aaccgcatctatgtgcaatcggcggtgcacgacgtcttcgcggagaaattcgtcgcgcgg
gtgcgcgaacttcgcgtcggggacggattttccgccggcgccaccatcggcccgatgatc
gacggccacgcgatcgagaagatcgaagcgcatgtcgccgacgcgctcgccaagggcgcc
gaacttcgctgcggcggcgagcggatcggcacgaacggtacgttcttcgagccgaccgtt
ctcaccggcatttcgcacgacatgcgcgtcgcccaggaggagacgttcgggccgatcgcc
ccgatcatccgcttcgagaccgccgaacaggtagtgaccgaggcgaatgacacgatctac
ggcctcgccgcttatttttatgccgagaatctgaagcgggtctggcatgtggccgaggcg
ttggaatacggcatggtcggcatcaataccggccgcatgtcctcagaggcagcccccttc
ggcggcatcaagcagtccggcatcggccgcgagggatcgcgccacggtctcgaggactat
ctcgagatgaaatatctctgcatgggcaacatctga
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