Sinorhizobium fredii HH103: SFHH103_02869
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Entry
SFHH103_02869 CDS
T01731
Name
(GenBank) putative response regulator/GGDEF domain transcriptional regulator
Organism
sfh
Sinorhizobium fredii HH103
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
PAS_7
5TM-5TMR_LYT
PAS_9
PAS
PAS_8
GGDEF_2
ECF_trnsprt
DUF3980
Motif
Other DBs
NCBI-ProteinID:
CCE97361
UniProt:
G9A0G5
LinkDB
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Position
complement(3093678..3095564)
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AA seq
628 aa
AA seq
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MNGIWGQFVGNLAFVSLAVSIWAHLSIWLRRRFVGHEKILFGLMAGVASIGSILLAVEFG
PGIHMDLRFAPLALAGMFGGPLAAAIAATLAAIFRTALGGVAAADGVIAIIAVTGMGLSV
NLVMRKRSPTLLHVIMLGAAVGSLLVVLMAVLPTLSKVHALAAMGLPMAAMNCAATVVCG
FIVLTTQYLELERRMLETAFSQSPDYLYVKDRDSRFVTVNENMIRLYRFKTTAEMVGLSD
FDLHPQRLAEELYHREQEVMRTGVPLLDSLEHIEDRDLLASKVPLRDKEGRVIGLAGVTR
DITERTALERELRESKNLLSHAMAGMSDGFAMFDRQGHLIFCNEQYRNAFPLSGSARVIG
AHISDIVRRAAETRERLNVPYDSVDEWINVATSTLHRNKDEEVQLHNGDWRSIKTRLATD
GTAMVVVSDITVMKQAEIALRLSAEQLKNLAETDGLTGIVNRRAFDEAFMREAARCARSD
APLSLLMIDLDRFKAYNDTYGHPAGDQCLRLVSKCLLNSAKRPADIVARYGGEEFVVLLP
ETNEREATIVAQQFASLLDEEKIAHSQSEFGRVTASIGIASAIGHVLQAEPSRLLSEADA
ALYEAKMRGRNRILVRTLADAADVKMAG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcatctgggggcagtttgttggcaaccttgcatttgtaagcctggcggtttcg
atctgggcgcatctgtcgatctggctgcggcggcggtttgtcggacatgagaagatcctg
ttcggactgatggccggcgttgcgtcgatcggctcaatcctgctagccgtcgaattcggc
ccgggcatccatatggacctgcgcttcgccccgctcgctctcgccggcatgttcggcggg
ccgctggcggcagccatcgccgcaaccctggcggctattttccggactgcgctcggcggt
gttgcggccgccgatggcgtcatcgcgatcattgccgtcacgggcatgggcctgagcgtc
aatctcgtcatgaggaagaggtcgccgacgcttctccacgtcatcatgctcggcgcggcg
gtaggaagtctgctcgtggtgctgatggcggtgctgcccaccctgtcgaaggttcatgcc
ttggcggcaatgggtctgcccatggcggcgatgaactgcgcggccaccgtcgtctgcggt
ttcatcgtgctgacgacgcagtatctggaactcgagcgcagaatgctggagaccgcgttc
tcgcaatcgcccgactatctttatgtcaaggacagggacagccggttcgtgaccgtcaac
gaaaacatgatccgcctctaccgcttcaagacgacggcggaaatggtgggcctgtcggat
ttcgatctccatccgcaaaggcttgccgaggaactgtatcatcgagagcaggaggtcatg
cgcacaggcgtgcctcttctcgattccctcgagcacatcgaagaccgcgacctgctcgcc
tccaaggtgccgctgcgcgacaaggagggacgcgtgatcggactggcgggcgtcacgcgc
gacattacggaacgcaccgcgctcgagcgggagctgcgcgaaagcaagaacctgctctcc
catgcgatggcgggaatgtccgatggcttcgcgatgttcgaccggcagggccatctcatc
ttctgcaacgagcaataccgcaatgcctttccgctgtcgggaagcgcccgggtgattggc
gcgcatatcagcgatatcgttcgccgcgccgccgaaacacgagagcggctcaatgtccct
tacgactcagtggacgagtggatcaatgtggcgacgtccacattgcaccgtaacaaggac
gaggaggttcagcttcataacggcgattggcgcagcatcaagacaaggctcgcgacggac
ggtacggcgatggtggtcgtctcggacatcacggtgatgaagcaggctgaaatcgctctg
cggctttcggccgagcagttgaagaacctggcggagacggatggattgaccggcatcgtc
aaccgtcgcgccttcgatgaagccttcatgcgcgaagcggccagatgcgcaaggagcgac
gctccgctcagcctgctgatgatcgatctcgatcggttcaaggcgtacaacgacacctac
ggccatccggccggcgatcagtgtctccgtctcgtcagcaagtgtcttctcaattcggcg
aaacgcccggccgatatcgtcgcccgctacggtggcgaggaatttgtcgtcctgctgccg
gaaaccaatgagcgggaagcgacgattgtcgcccagcaatttgccagcctgctcgacgag
gaaaagatcgcccactcgcaaagcgagttcggacgggtcacggcaagcatcggcatagcc
tcggcaatcgggcatgtgctgcaggcggagccgagccgcctcctgtcggaggcggatgcc
gctctctacgaagccaagatgcggggccgcaaccgcatcctcgtgcgcacgctcgccgat
gcggcggacgtcaaaatggccggttag
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