Sinorhizobium fredii HH103: SFHH103_03015
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Entry
SFHH103_03015 CDS
T01731
Name
(GenBank) putative Type I secretion system ATPase, PrtD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SFHH103_03015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfh02000
]
SFHH103_03015
02044 Secretion system [BR:
sfh02044
]
SFHH103_03015
Transporters [BR:
sfh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SFHH103_03015
Secretion system [BR:
sfh02044
]
Type I secretion system
Multiple protein transporter
SFHH103_03015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Zeta_toxin
AAA_22
AAA_29
nSTAND3
RsgA_GTPase
DUF6426
Motif
Other DBs
NCBI-ProteinID:
CCE97507
UniProt:
G9A1C7
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All DBs
Position
3265943..3268276
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AA seq
777 aa
AA seq
DB search
MTDDRDQSWEQFATSGDEVADEAESRPRGLDVEAARQQLLRRIDRRENVLDRTVKELDEV
IDHLRGAAAARTSQETNREVTAAPVASERRAAAPAEVTQQTRTPPLTAVNANTAEIVPGP
QGDAGKPAPVQEARKPEPRFEKPAIEPRAEVKDKSSISGMVVIDGDRGPIKAEPRVPDKG
GSGGGGGHGGGGGGGGGGVFHKRLGPVDFSVSLKAGLRAIKQNLMVVMVFTLATNVLVLA
IPVYLFQISDRVLTSRSIDTLVMLTGLIVAAVILQAIFDGIRRMILMRTAVEVAAQLGAP
ILSAAARASLHSNGREYQTLGDLQQLRSFLVSSTLLSFLDAPIAPFFVLAVFLIHPHLGS
IVIASALLLLVVTVLNQKATAAPFGEANTFQSKANLHLDSMSRNSQIINALAMIPEAVRI
WGKDMAGSLRAQVLAQDRNIALASLSKAVRLLTQVTMLGWGANLALNGELTGGMVIAASI
VAGRALGPIEGAIEGWHQVIQSRAAYGRIASLLQSSPLNFERLKLPRPEGRLDVERLLFV
PNGTKRVVLNGVTFALSPGDSLAVIGSSGAGKTTLGKMLVGSILPTSGNVRLDLMDLRNW
DQRQFGESIGYLPQDVQLFPGTIKANIARMQEDATDADIYAAAKLADVHDMIASLPHGYE
TFVAADGSPLSGGQKQRVALARAFFGNPRMVVLDEPNSNLDSAGEAALTRALAHAKKQKI
TVITITQRPALLNSVDKVLLLVNGTVALFGMRQDVLKALSTRGMNLEGNPLDHNQLT
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaccgcgatcaatcctgggagcaattcgcgacaagtggagacgaggttgcg
gacgaggcggagtcccggccgcggggcctggatgtcgaggctgcccggcagcaattgctc
cgcagaatcgaccgccgggaaaatgttttggatcgcactgttaaggagctcgacgaggtg
attgaccatcttcgcggcgcggcggccgcaagaaccagccaggaaaccaatcgtgaggtg
acggccgcacccgtcgcatccgaacggcgtgccgcggcgccggccgaggttacccaacag
acacggacgcccccgctgacggccgtcaacgcgaacaccgcggaaatcgtgcccggtccg
cagggcgatgccggcaagcctgcccctgtgcaggaggcccgcaagcccgaaccgcgcttc
gaaaagccggccatcgagcccagggccgaagtcaaggacaagtcttcgatatcgggcatg
gtggtgatcgacggcgaccgcggccctatcaaggccgagccgcgcgtccccgacaagggt
ggctccggcggcggcgggggccatggtggcggaggtggaggcggaggcggaggggtcttc
cataaacgcctcgggccagtcgatttttccgtcagcctcaaggccggtcttcgggcgatc
aagcagaacctgatggtcgtgatggttttcacactcgccaccaacgtgctggtgctcgcc
atacccgtctatctgtttcagatctcggaccgggtgctgaccagccgctcgatcgacacg
ctggtcatgctgaccggactgatcgtcgctgcggtcattctgcaagccatattcgacgga
atccgccgcatgatcctgatgcggacggcggtggaggttgccgctcagctcggcgcgccg
atcctcagtgcggctgcccgcgcctcgctgcacagcaacgggcgcgagtatcagaccctt
ggggatctgcagcagcttcgctccttcctcgtgtcgagcacgctgctttccttcctcgac
gccccgatcgccccgttcttcgtcctggcggtcttcctgatccacccgcatcttggctcg
atcgtcatcgcctcggccctgcttctgctcgttgtcaccgtattgaaccagaaggcgacg
gcagccccctttggcgaggccaacaccttccagagcaaggccaacctgcatctcgactcg
atgtcgcgcaattcgcagatcatcaacgcgctcgcgatgatccccgaagcggtccgcatt
tggggcaaggacatggcagggtcgctcagagctcaagtgctggcgcaagaccgcaacatc
gctcttgcctcgctttccaaggccgttcggctgctcacccaggtcacgatgctcggctgg
ggcgccaatctcgcccttaacggcgagctcacgggcggcatggtgatcgcggcatcgatt
gtcgccggccgcgcgctcgggccgatcgaaggcgcgatcgaaggctggcaccaggtcatt
cagtcgcgcgccgcctatgggcgcatcgcttcgctgctgcagagctcgccgctgaacttc
gagcggctgaagctgccgcgccctgaaggtcgcctcgacgtcgagcggctgcttttcgtc
ccgaatggcaccaagcgtgttgtcctcaacggcgtgaccttcgcgctcagtccgggcgac
tcgcttgccgtgatcggcagttccggagccggcaagacgacgctcggcaagatgctcgtc
gggtccatcctgccgacatccggcaatgtccggctcgatctcatggacttgaggaactgg
gatcagcgccagttcggcgaaagcatcggctacctgccgcaggacgttcaactctttccg
ggtacgatcaaggccaatatcgcccgcatgcaggaggacgccacggacgccgacatctac
gctgccgccaagctcgccgacgtgcatgacatgatcgcatcgctgccgcacggttacgaa
accttcgtggcggcggacggatcaccgctctccggcggacaaaagcagcgcgtcgcgctc
gcccgggccttcttcggcaatccgcgcatggtcgtgctggacgagccgaattccaatctc
gacagcgccggcgaggctgcactgacgcgggcgcttgcccatgcgaagaagcagaaaatc
actgtcattaccattacccagcggcccgccctcctgaacagcgtcgacaaggtattgctc
ctcgtgaacggcaccgtggcgcttttcggcatgcgccaggatgtcctgaaagccctttcc
acgcgcggcatgaatcttgagggcaacccgctcgaccacaaccagctgacgtag
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