Streptomyces microflavus: SFUL_1543
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Entry
SFUL_1543 CDS
T02650
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sfi
Streptomyces microflavus
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfi03019
]
SFUL_1543
Enzymes [BR:
sfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SFUL_1543
Messenger RNA biogenesis [BR:
sfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SFUL_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_30
AAA_22
AAA_19
AAA_25
ResIII
NTPase_1
AAA_11
HA2_N
nSTAND3
AAA
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGK76512
UniProt:
N0CU28
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Position
1733105..1735606
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AA seq
833 aa
AA seq
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MIRTEALDLLPVRTAVPALRRALDDRGVAVLCAPPGTGKTTLVPLVLAGLTGEGPVRRVV
VAEPRRIAARAAARRMAWLLGEQPGGRIGFTVRGERVVGRDTVVEVVTTGVLLQRLQRDQ
ELAGVDVVIIDECHERHLDADTVAAFLLDVREAIRPDLRLVAASATTDAEGWARLLGDAP
VVEAQGVSYPVEVVWAPPARPVKPPHGMRVDPALLTHVAATVRRALGEREGDVLCFLPGV
GEISRVAGQLAGADAEVLQVHGRASAAVQDAVLAGSSGGRRVILATSVAESSLTVPGVRV
VVDSGLAREPRTDHARGLSALTTVRASQAAGRQRAGRAGREAPGAVYRCWEQAEDGRLAR
FPAPEIKVADLAAFALQAACWGDPGASSLALLDPPPAGAMGAAREVLEAIGAVDAEGRVT
TRGVRMSRLGLHPRLARALLDGAKEAGARRAAEVVALLSEEPPREYGDDLAAALRTARRG
QDGYAARWKQEVRRLSSQVEGAGSGESRSDDAVVGLVAALAFPERVARARGDGAFLMVSG
TGAELRDGSRLRSAPWLAVAVADRPSHAASARVRLAAVVDEPTALLAAGHLRVRGEEVRW
ADGEVVARSVDRVGAVELSVRPLKQPDPELVRGALVEGLRREGLGLLRWTRDSEQFRLRL
AFLHRVLGAPWPDVSDEALPAETGAWLEPELSRARRRSDLGRIDAGQALRRLLPWATGEA
VRLDELAPERIEVPSGSRIRVEYGGEQPVLAVKLQELFGLSETPRVAGVPVLVHLLSPAG
RPAAVTADLASFWQDGYKAVRAELRGRYPKHPWPEDPTTVQATRYTSARLKRS
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcaccgaagccctcgacctgctgcccgtccgcaccgccgtgcccgccctccgg
cgcgcgctcgacgaccggggcgtcgccgtcctctgcgccccgcccggcaccggcaagacg
accctcgtcccgctggtcctggccgggctgaccggcgagggcccggtgcgccgggtcgtc
gtcgccgagccgcgccgcatcgccgcacgggcggcggcgcggcgcatggcgtggctgctg
ggcgagcagccgggcgggcggatcggcttcaccgtgcgcggggagcgcgtggtcgggcgg
gacacggtggtggaggtcgtgacgaccggggtgctgctccagcggctccagcgcgaccag
gagctggccggggtcgacgtggtgatcatcgacgagtgccacgagcgccatctggacgcc
gacacggtggccgccttcctcctcgacgtacgggaggcgatccggcccgatctgcggctg
gtggcggcctccgcgacgacggacgcggaggggtgggcgcggctgctgggggacgccccg
gtggtcgaggcccagggcgtctcgtatccggtggaggtggtctgggcgccgcccgcccgg
ccggtgaagccgccgcacgggatgcgcgtcgacccggcgctgctcacgcatgtggccgcc
accgtgcgccgggcgctcggtgagcgggagggggacgtgctctgcttcctgcccggcgtc
ggggagatctcgcgggtggccgggcagctcgccggggcggacgccgaggtgctccaggtc
cacgggcgcgcctcggccgccgtgcaggacgcggtgctcgccgggtcctccggcgggcgg
cgggtgatcctggcgacctccgtggcggagtcgtccctgaccgtgcccggtgtgcgggtc
gtcgtcgactcgggcctcgcccgggaaccccgtaccgaccacgcccggggcctgagcgcc
ctgaccaccgtccgggcctcgcaggcggccgggcggcagcgtgcgggccgggcggggcgg
gaggcgccgggggcggtgtaccggtgctgggagcaggccgaggacgggcggctcgcgcgc
ttcccggccccggagatcaaggtcgccgacctcgcggcgttcgcgctccaggcggcgtgc
tggggcgacccgggcgcctcctcgctcgcgctgctggaccccccgcccgccggggcgatg
ggcgccgcccgggaggtgctggaggcgatcggcgcggtggacgcggagggccgggtcacg
acacgcggcgtacggatgtcccggctcgggctgcacccccggctggcccgcgccctgctg
gacggcgcgaaggaggccggggcgcggcgggccgcggaggtggtggccctgctcagcgag
gagccgccgagggagtacggggacgatctcgcggcggcgctgcggacggcccgccggggt
caggacgggtacgcggcgcggtggaagcaggaggtgcgccggctgtcgtcccaggtggag
ggcgccggctccggcgagagccgctccgatgacgccgtcgtggggctcgtcgccgcgctg
gcgttccccgagcgggtggcgcgggcccggggcgacggggccttcctcatggtgtcgggg
accggcgcggagctgcgggacgggtcgcggctgcgcagcgcgccctggctggccgtcgcc
gtcgcggaccggccctcccacgcggcctccgcccgggtgcggctggcggcggtggtcgac
gagcccaccgcgctcctggccgccgggcatctgcgggtgcgcggcgaggaggtccgctgg
gcggacggcgaggtggtggcccggtcggtggaccgggtgggggcggtggagctgtcggtg
cggccgctgaagcagccggatccggagctggtgcgcggggccctggtggaggggctgcgg
cgggaggggctcgggctgctgcggtggacccgggacagtgagcagttccggctgcgtctg
gcgttcctgcaccgggtgctgggcgcgccgtggccggacgtctcggacgaggcgctgccg
gcggagaccggggcgtggctggagccggagctttcccgggcccggcgccgctccgacctg
ggccggatcgacgcgggccaggcgctgcgccggctgctgccgtgggcgacgggtgaggcg
gtgcggctggacgagctggcgccggagcggatcgaggtgccgagcggctcccgtatccgg
gtcgagtacggcggcgaacagcccgtactcgcggtgaagctccaggagttgttcgggctg
agcgagacgccccgggtggccggggtgccggtcctggtccatctgctctcccccgccggc
cggcccgccgctgtcacggcggacctggcgtcgttctggcaggacggctacaaggccgta
cgggcggagctgcgcggccgctacccgaagcacccgtggccggaggaccccacgaccgta
caggcgacgcggtacacctcggccaggctcaagcgctcgtag
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