Streptomyces ficellus: EIZ62_08010
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Entry
EIZ62_08010 CDS
T06929
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfic
Streptomyces ficellus
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfic03016
]
EIZ62_08010 (truB)
Enzymes [BR:
sfic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EIZ62_08010 (truB)
Transfer RNA biogenesis [BR:
sfic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EIZ62_08010 (truB)
Prokaryotic type
EIZ62_08010 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QGV78194
UniProt:
A0A6I6F624
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All DBs
Position
complement(1853554..1854453)
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AA seq
299 aa
AA seq
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MTQHNRTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKAT
KLLGHLALTEKEYLGTIRLGQDTVTDDAEGEITSSTDASRVTREAVDAEVAKLTGDIMQV
PSKVSAIKIDGKRSYARVRGGEEFDIPARPVTVSSFRVYDMRDAVAEDGTPVVDLVVSVV
CSSGTYIRALARDIGAGLGVGGHLTALRRTRVGPYKLDTARTLDQLQEELTVMPIADAAA
AAFPRWDVDERRAKLLLNGVRLDMPAYDTAPVAVFGPEGRFLALVEEKNGKAKSLAVFG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcacaacaggacgcccgacgggcttgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtcgtcgccaagatgcgcgggatcgcccggacccgccgcgtcggacac
gcggggacgctcgacccgatggcgaccggcgtactggtcctcggcgtcgagaaggccacc
aagctcctcggtcacctcgcactgaccgagaaggagtacctcggcaccatccgcctcggc
caggacaccgtcaccgacgacgcggagggcgagatcacctcgtccaccgacgcctcccgg
gtcacccgcgaagccgtcgacgcggaggtcgccaagctcaccggcgacatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacggcaagcggtcgtacgcccgcgtccggggc
ggcgaggagttcgacatcccggcccgcccggtgaccgtctcctccttccgggtgtacgac
atgcgcgacgccgtcgcggaggacggcacccccgtcgtcgacctcgtcgtctcggtcgtc
tgctcctccggcacctacatccgcgccctcgcccgcgacatcggcgccgggctgggcgtc
ggcggccacctcaccgcgctccggcgcacccgcgtcggcccgtacaaactggacaccgcg
cggacgctggaccagctccaggaggagctgaccgtcatgccgatcgccgacgccgccgcg
gcggcgttcccccgctgggacgtcgacgaacgacgcgccaagctcctcctgaacggcgta
cgcctggacatgcccgcgtacgacacggccccggtcgccgtcttcggcccggagggccgg
ttcctggcgctggtcgaggagaagaacggcaaggcgaagagcctggccgtcttcggctga
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