Streptomyces formicae: KY5_4888
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Entry
KY5_4888 CDS
T05416
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03420
Nucleotide excision repair
sfk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KY5_4888
03430 Mismatch repair
KY5_4888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_4888
Enzymes [BR:
sfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KY5_4888
DNA repair and recombination proteins [BR:
sfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KY5_4888
MMR (mismatch excision repair)
Other MMR factors
KY5_4888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ATL29906
UniProt:
A0A291QEG4
LinkDB
All DBs
Position
5684875..5687439
Genome browser
AA seq
854 aa
AA seq
DB search
MSSLFDDSFLADLQPSRAADEEPPPPPEDTAPEPVPDDLFDGKFDAPMTRDTHYRGGAPR
PVIDPATLLDGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLAERGAHPGQIL
AITFTNKAAGEMKERVEQLVGPRANAMWVSTFHSACVRILRREYKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEDFAGQAADGFEKTLAQAYAMY
QSRLREANALDFDDLIMTTVHLLRAFPDVAEHYRRRFRHVMVDEYQDTNHAQYALVRELV
GPSGGEGDDPGELCVVGDADQSIYAFRGATIRNILQFEEDYTDATTILLEQNYRSTQTIL
TAANAVIERNESRRPKNLWTNQGAGARITGYVADTEHDEAQFVADEIDRLTDAGDAKAGD
VAIFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDAVPLRR
ILNVPKRGIGDRAEAMIDALSQREKISFPQALRRVDEAYGMAARSTNAVRRFNTLMEELR
TIVESGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQESGQAAG
ATEATEGAEGDGGENAADAEGAGEAAGAATTGSLSDFLERVALVADSDQIPDEEDDGSGV
ITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRSLGQVKELEEERRLAYVGITRARERLYLT
RSSMRSAWGQPSYNPPSRFLEEIPDTHLDWKRTGAVGAPASSGSSGSSGPAGGIASSLSS
SRSRSGGAQGFATRRATEKPVVALAVGDRVTHDQFGLGTVVGVKGSGANAEATVDFGEPK
PKRLLLRYAPVEKL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggacctgcagccctcacgggccgcggac
gaagagcccccgccgccacccgaggacaccgctccggagcccgttccggacgatctgttc
gacgggaagttcgacgcgcccatgacccgggacacgcactaccgcggtggtgccccgcgc
ccggtcatcgacccggcgacgcttctcgacggtctcaacgagaaccagcgcgcggccgtc
gtgcacgcgggctccccgctgctcatcgtcgccggtgccggttccggcaagacccgcgtg
ctgacccaccgcatcgcgtacctcctcgccgagcgcggcgcccaccccggccagatcctc
gcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtc
ggcccccgggcgaacgcgatgtgggtgtcgacgttccacagcgcctgcgtccgcatcctg
cgccgcgagtacaagaagctgggcttcacgtcctccttctcgatctacgacgccgcggac
tccaagcgtctgatggccctggtctgccgcgatctggacctcgacccgaagaagttcccg
ccgaagtccttcagcgccaagatctccaacctgaagaacgagctgatcgacgaggaggac
ttcgcgggccaggccgccgacggcttcgagaagaccctcgcccaggcctacgcgatgtac
cagtcccgcctccgcgaggcgaacgcactggacttcgacgacctgatcatgacgacggtc
cacctcctgcgcgccttccccgacgtcgccgagcactacaggcgccgcttccggcacgtc
atggtcgacgagtaccaggacaccaaccacgcgcagtacgccttggtgcgcgagctggtc
ggcccctccggaggcgagggcgacgaccccggcgagctctgtgtggtgggtgacgcggac
cagtcgatctacgccttccgcggcgccaccatccgcaacatcctccagttcgaggaggac
tacacggacgcgacgacgatcctcctggagcagaactaccgctccacgcagacgatcctg
accgccgcgaacgcggtcatcgagcggaacgagagccgccgcccgaagaacctgtggacc
aaccagggcgcgggcgcgcgcatcacgggatacgtcgcggacaccgagcacgacgaggcg
cagttcgtcgccgacgagatcgaccggctcaccgacgcgggcgacgcgaaggcgggcgac
gtcgcgatcttctaccgtacgaacgcgcagtcccgtgtcttcgaagagatcttcatccgc
gtcggcctgccctacaaggtcgtcggcggcgtgcgcttctacgagcgcaaggaggtcagg
gacgtcctcgcgtacctgcgcgtgctcgccaaccccgaggacgcggtgccgctgcggcgc
atcctcaacgtccccaagcgaggcatcggcgaccgcgccgaggcgatgatcgacgcgctg
tcccagcgcgagaagatctccttcccgcaggcgctgcgccgcgtcgacgaggcgtacggc
atggccgccaggtcgaccaatgccgtcaggcgtttcaacacgctgatggaggagctgcgg
accatcgtcgagtccggcgcgggcccggcggtcgtcctggaggccgtgctcgaacggacc
ggctatctcgccgagttgcaggcgtccaccgacccgcaggacgagacgcgcatcgagaac
ctccaggaactcgccgccgtggcgctggagttcgagcaggagagcggccaggccgccgga
gccaccgaagccaccgaaggcgcggagggcgacggcggggagaacgcggcggacgcggag
ggtgccggggaggcggccggtgccgcgaccaccggttcgctctccgacttcctggagcgc
gtcgccctggtcgccgactccgaccagatcccggacgaggaggacgacggctccggagtc
atcaccctgatgacgctgcacaccgccaagggcctcgaattccccgtggtcttcctgacc
ggcatggaagacggcgtcttcccgcacatgcgctcgttggggcaggtcaaggagctggag
gaggagcggcgcctggcgtacgtgggcatcacgcgcgcgcgtgagcggctctatctgacg
cggtcctcgatgcgcagcgcctggggccagccctcgtacaacccgccgtcgcgcttcctg
gaggagatcccggacacccacctggactggaagcggacgggcgcggtcggcgccccggcg
tcctcgggttcgtcgggttcgtctggtccggccggcggcatcgcctcgtcgctgtcctcg
tcgcggtcgcgctccgggggcgcgcaggggttcgccacgcgccgtgcgacggagaagccg
gtggtcgcgctcgcggtcggcgaccgggtcacgcacgaccagttcggcctcgggaccgtg
gttggcgtcaagggatcgggtgcgaacgccgaggcgacggtggacttcggcgagcccaag
ccgaagcggctgctgctgaggtacgcgccggtggagaagctctag
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