Shigella flexneri 301 (serotype 2a): SF4072
Help
Entry
SF4072 CDS
T00097
Symbol
hupA
Name
(RefSeq) transcriptional regulator HU subunit alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfl03032
]
SF4072 (hupA)
03036 Chromosome and associated proteins [BR:
sfl03036
]
SF4072 (hupA)
03400 DNA repair and recombination proteins [BR:
sfl03400
]
SF4072 (hupA)
DNA replication proteins [BR:
sfl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SF4072 (hupA)
Chromosome and associated proteins [BR:
sfl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SF4072 (hupA)
DNA repair and recombination proteins [BR:
sfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SF4072 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-GeneID:
1027571
NCBI-ProteinID:
NP_709794
UniProt:
P0ACF3
LinkDB
All DBs
Position
4219262..4219534
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactcaactgattgatgtaattgcagagaaagcagaactgtccaaaacccag
gctaaagctgctctggagtccactctggctgcaattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccatcgcgctgagcgtactggc
cgcaacccgcagaccggtaaagaaatcaaaattgccgcagctaacgtaccggcatttgtt
tctggcaaggcactgaaagacgcagttaagtaa
DBGET
integrated database retrieval system
