Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02238
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Entry
SPHFLASMR4Y_02238 CDS
T04949
Name
(GenBank) autotransporter beta-domain protein
Organism
sfla
Sphingorhabdus sp. SMR4y
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Trypsin
HsbA
Motif
Other DBs
NCBI-ProteinID:
ASK88981
UniProt:
A0A220W836
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Position
complement(2281562..2285116)
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AA seq
1184 aa
AA seq
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MNKNFGHSKRSVLLRTAAAGAIATLALATPAQAIVPNDNYTPGDISDPEDSVNGIGQFFR
NDGFVCTGTLINPRAVLFAAHCVNDRPETDYETNGVISSAFSFNGNALPGFVDWINNGFA
SNPDLFVYNISQIAYHPDSLVDPNAFGFLEADIAVATLSDPAANIPTWALLFSPLPDPGE
IDDVDGTGYHVKISGYGRSGSGTTGASVGIDWRRKSAENMLGALTTFDDRNTFLFGDPFG
DLPQVLYRLDFDDPNKTSPFDFNLYKDEPREVEGTTAGGDSGGPLILDAANNSLSTEDLQ
IGVLSGGSRFFGAQVFSSYGTESFYQPLFLFAEYIAAVNPYRYVSAKAGDGDWEDATHWQ
TDLDPAYRIIDENGNVVNGFPDTQSGGVEQSTPQFGEVCFDLEGDNPGDECYDLATGTST
PPARPAPTPTPAPTATPASSIGVAQIPNAEAVSPTGETQVAATAVQPAGSPQLLASAAIR
GEGMIVENIAISGGASIVEDIAISGGATPVGELAISGGATPVAITANGGPEGAEEAPQAE
GDPLPEPTLDNGLAGATDFVPDNIDADVANGIKARYFEVTLSQAGTTSLNSDVTIDRLNV
GGAAGLLINGGASLSALIDVNQTAGRVAVNGTLNSVGDYSLFSGLLSGTGTINAPFLTNI
AGGIAPGSIGTIGTLTVNGNAILSSGSTLMIDIGASGDSDLLAVSEEANIGGTVMFSPVD
GFQTATPSTYRILTAAGGVTDQFDSAAQISAILLSEFSYSANAVDVTISAQSYRNVVDSG
NPVQTSFADLMDNNRGNATVAGLFSFLDFTDAGTIQATFDSWAPTTESTVQAMGQAFLGN
VSDFYQNRISLADRSSNGGTIAVIGRPMQLAATSLGGIAMNGANALSDAAANADDTEVRS
GGVNEDMAVYLAGGFVNGDGGSMPLTNPAAGSDGEDEFDGFFIAGGLEYYFDEGSFLGIS
AYYSDVDATAALGNSAQSKTIMGSIYGRKAMSGGLVLDGRATLGTYNAETLRNVSLGTQS
FSLTTDDDSMVYAAEVGLSKEMELNDVIAAPGIRARAAKINFSNVDEQGGGPALTIIRPD
YSSIQGLAGIEFKSKPGRKLQMRASMNYVHEFEDNPNSFGANFVGGNGAVAPFALAGRDK
DWGEVGIGLRYNMGNVSIDLSADSTVGRSDVSSQVYSGAISFRF
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatttcggacattccaaaagatcggtactattgcggacagctgcggcaggg
gcaattgccacgctcgcactggctactccggcacaggccattgtgccgaatgataattat
acgccaggcgatatcagcgatccggaagatagcgtaaacggtatcggccagtttttccgg
aatgacggctttgtttgtacgggtaccctgatcaatccgcgtgccgtcctgtttgcagca
cactgcgtcaacgaccgcccggaaacggattatgaaaccaatggcgtaatctcgtccgca
ttctcattcaatggcaatgcgcttccggggttcgtcgactggatcaacaacggatttgca
tccaacccggacctgtttgtctacaatatcagccagatcgcttaccaccccgattccctg
gtcgatcctaacgcttttggttttctcgaagccgatattgccgtagccactctttctgat
ccggccgccaatatcccaacctgggcgttgctgttttccccgcttcccgatcccggcgaa
attgatgatgtcgacggtaccggctatcatgtgaaaatttccggctatggtcgtagcggc
agtggtacgacaggggcgtcggtgggtatcgactggcggcggaaatctgccgaaaatatg
ctgggtgcgcttaccacatttgatgacagaaacaccttcctgtttggtgaccctttcggg
gatttgccacaggttttgtaccggcttgattttgacgatccgaacaaaaccagccctttt
gattttaacctttacaaagatgagcctcgggaagtcgaaggcacaaccgcaggcggagat
tccggtggcccgttgatccttgacgccgcaaataacagcctgtcgacggaagatttgcag
atcggcgtgctgtccggcggttcgcgcttttttggagctcaggtcttcagctcttacggc
acggaaagcttttaccagccgctgttcctgtttgctgaatatatcgcggctgtgaatccc
tatcgctatgtcagcgcgaaagcgggtgacggcgactgggaggatgccacccactggcag
accgatcttgatccggcctatcgcatcatcgatgaaaacggtaatgtggtaaatggattc
cccgatacccagtccggcggcgtcgagcagtctacgccgcaattcggtgaggtctgtttc
gatcttgagggcgataatcccggagacgaatgctacgatttggcgaccggtactagcacg
ccgccagcacgtcccgcgcccacaccaacgcctgcgcctacggcaacgccagcctcatcc
atcggtgtggcgcaaatcccgaacgcggaagctgtctcgcctaccggcgaaactcaggtt
gcggcaactgccgtacaaccggctggctcgccccagttgcttgccagtgcggccattcgc
ggcgagggcatgatcgttgaaaatattgcaatcagcggtggcgcatcgatcgtcgaggat
attgcaatcagcggcggcgcgaccccagttggcgagcttgccatcagtggcggtgccacg
cccgttgccattaccgctaatggcggtccggagggcgcggaggaagcccctcaggcagaa
ggcgatccgcttccggaacccactctggataatggacttgccggagcaaccgattttgtg
ccggataatatagatgccgatgtcgcaaatggcattaaagctcgctatttcgaagtgacg
ctcagtcaggcgggtaccacgtcgttgaacagcgatgtcacgattgaccgactcaatgtt
ggcggcgctgctggattgttgatcaatggtggggcaagcctttcggcattgatcgacgtt
aaccagaccgccggtcgcgtcgcagtcaacgggacgctgaacagcgtaggtgattattcc
ctgttttccggattgctttcgggtactggcacgatcaacgctccgttcctgaccaatatc
gcgggcggtatcgcccccggttcgattggtacgatcggaacattgaccgtgaacggaaac
gcaattctgtcgtccggttcgaccttgatgattgacattggcgcatccggggattccgat
cttctggccgtcagcgaagaagccaatataggcggcacggtgatgttttcgccggttgac
ggcttccagacggcgactccgagcacctaccgcattctaacagcggctggcggtgtgacc
gatcagttcgatagcgcagcacagatttcggcgatcctgctttccgaattcagctatagt
gcgaatgccgttgatgtcaccatcagtgcgcaaagctatcggaacgttgtcgactcgggc
aacccggtccaaaccagctttgccgacctgatggacaacaaccgtggcaatgcaacggtc
gctggccttttctccttcctggactttaccgatgccggtaccattcaggctacctttgac
agctgggcgcccacaacggaatccactgttcaggccatggggcaagcatttctcggcaat
gtttccgatttctaccagaacaggatcagtctcgccgaccggtcctcgaacggcggcacc
attgctgtgattggtcgcccgatgcagctggcggcaacgtcgctgggcgggattgctatg
aacggtgcaaatgctctgagtgatgctgctgcgaatgcagatgataccgaagtccgctcc
ggtggcgtcaacgaggacatggctgtttatctcgccggtggttttgtgaatggtgatggc
ggttccatgccattgaccaatcctgcggcgggctctgacggagaagacgagtttgacggt
ttcttcatcgccggtggcctcgaatattatttcgatgaaggctctttcctcgggatttcc
gcctattattcggatgtcgatgcgacggctgctctcggtaattcggcgcaatccaaaacc
atcatggggtcgatctacggcaggaaagcaatgtcgggtggtctggttctagatggccgc
gctacactgggtacctataatgccgaaacgctgcggaacgtgtcgcttggtacgcaatcc
ttcagcctgacaaccgatgacgacagcatggtatatgccgctgaagttggtctgtcgaaa
gagatggaactgaacgatgtgatcgcggcacccggcattcgggcccgtgcagccaagatc
aacttcagcaatgtggatgagcagggcggtggaccggctttgacgatcattcgtcccgac
tacagcagcattcagggtctggccggtatcgagttcaagtccaagccgggccgtaaactg
cagatgcgcgcatccatgaattatgttcatgaattcgaggataacccgaacagcttcggt
gcgaatttcgtcggtggcaatggtgcagtagcaccattcgcgctggctggacgcgacaag
gactggggcgaagtcggcatcggcttgcgttacaatatgggcaatgtctcgattgacctt
tccgctgattcaacggtcggccgttcggatgtgtccagccaggtctattcgggtgcgatc
agcttccgcttctag
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