Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03292
Help
Entry
SPHFLASMR4Y_03292 CDS
T04949
Symbol
gcvA
Name
(GenBank) glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfla03000
]
SPHFLASMR4Y_03292 (gcvA)
Transcription factors [BR:
sfla03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SPHFLASMR4Y_03292 (gcvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ASK90019
UniProt:
A0A220WB34
LinkDB
All DBs
Position
complement(3353123..3354001)
Genome browser
AA seq
292 aa
AA seq
DB search
MRRLPPLRALEAFIRVARLGSSKAAAAELALSAPALSRRIKSLEDHIGKPLFERRNQSMV
LNGDGEALLKAVAPALEVIGEAVDQMTVTGGDMRLRLGVLPLFGATRLLPRLPELKKLYP
KLHINVDTSSHAENMLGDAVDAAIIISDDVDPNLYAVKLDSNKVYAIASVELTKGPNAIS
KPEDLQNHNILIHSNMTRAFDQWKEVVGLPDLQPAGIDHLDSGPLMLEAAAQGLGIAIMH
GGHFSDANDSRLIRLFDHQVDSPYSYWFVCRKRDMKNRAVRIFHDWVVKAGL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtttacctccccttcgcgccctcgaggccttcattcgcgtagcccgtctgggc
tcatccaaggctgcggctgccgagcttgcactgtctgcaccggcgctcagccggcgaatc
aaatcgctggaagaccatatcggcaagcccctgttcgaacggcgcaaccagtcgatggta
ttgaacggcgacggcgaggccctgctgaaagcggtcgcgccggcccttgaagtcatcggc
gaagcggtcgaccagatgaccgtcaccggcggagatatgcgtctgcgtcttggcgtgctg
cctttgttcggagcgactcgcttgctgccgcgcctgccggagctcaaaaaactctatccc
aagctgcatatcaatgtggacacatcctctcatgccgaaaatatgctgggcgatgccgtc
gatgcggcgatcatcatcagcgacgatgtcgaccccaatctctatgcggtgaaactagac
agcaacaaggtttacgcgattgcatcggtggaactgaccaagggccccaatgccatcagc
aagcccgaggatctgcagaatcacaatattctgattcacagcaacatgacccgtgcgttc
gaccagtggaaggaagtcgtcggcctgcccgatctgcagccggccggcatcgaccatctc
gacagcggaccgctgatgctggaagccgcggcgcagggtcttggcatagcgatcatgcac
ggcggccatttttcggatgccaatgattcccggctgatccggctgttcgatcatcaggtc
gacagcccgtacagctactggttcgtctgccgcaaacgcgacatgaagaaccgcgcggtc
cggattttccatgactgggtggtaaaagcgggcctctag
DBGET
integrated database retrieval system
