Sphingosinicella flava: IC614_07755
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Entry
IC614_07755 CDS
T09809
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sflv
Sphingosinicella flava
Pathway
sflv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IC614_07755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sflv03400
]
IC614_07755
Enzymes [BR:
sflv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IC614_07755
DNA repair and recombination proteins [BR:
sflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IC614_07755
BRITE hierarchy
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QPQ54257
UniProt:
A0A7T2GIC6
LinkDB
All DBs
Position
complement(1488237..1489688)
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AA seq
483 aa
AA seq
DB search
MRAVTLAHEEDFDGWRDAARSLALARVPPSEVTWSVGDAPPDLFGEEAVMPAVEGPAFSV
PRPFVDLARTVICHSEPERFSLLYAMLLRLRARPGVLGDKADPLLRRLEEMAKSVRRDMH
KMHAFVRFREVDEPDGGTRYVAWFEPDHHIVRSNAGFFVRRFTTMRWSILTPELSIHWDG
ETLTQSPGATRADAPSGDPVEETWKTYYASIFNPARVKVKAMTKEMPKKYWKNMPETALV
GDLIAGAQAREAEMVARSRSKVAAEVREAGHDAAEAAERRLQPGGNALAAWEALFEEARG
CTRCHLYKHATQTVFGEGPVDAPLMFVGEQPGDQEDLAGRAFVGPAGQLFDKALKEAGIN
RAKAYITNAVKHFKFEPRGTRRIHQTPKADEIKACHYWYDRERALIRPQVTVALGATAAR
QVFGRAVTISSLRGEAHKLAEGGEAWVTVHPSFLLRVRDNREAEYQRFVEDLARIGERVK
ALS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgtaacgctcgcccatgaggaggatttcgacggctggcgggatgccgcccgc
agcctcgccctcgcccgggtgccgccgtccgaagtgacgtggagcgtcggcgacgcgccg
cccgacctgttcggcgaggaagcggtgatgcccgcagtggaaggcccggccttttcggtg
ccccggccgttcgtcgacctggcgcggaccgtcatctgccattccgagccggagcgtttc
tccctgctctacgcgatgctgctgcggctgcgcgcgcggccgggcgtgctgggggacaag
gccgatccgctgctgcggcggctggaggagatggcgaaatcggtgcggcgggacatgcac
aagatgcacgccttcgtccgcttccgcgaagtggacgagccggacgggggcacccgctat
gtcgcctggttcgagcccgatcatcatatcgtgcggtcaaatgcgggcttcttcgtgcgg
cgcttcaccacgatgcgctggtcgatcctgacgcccgaattgtcgattcattgggacggc
gagacgctgacgcaaagccccggcgcgacgagggccgacgcgccgtccggcgatccggtc
gaggagacgtggaagacctattacgcgtccatcttcaatccggcgcgggtgaaggtcaaa
gccatgaccaaggagatgccgaagaaatattggaaaaacatgccggagacggcgttggtc
ggggacttgatcgcaggcgcgcaggcgcgggaggcggagatggtcgcacggtcgcggagc
aaggtcgcggcggaggtgcgggaggcagggcacgatgccgccgaagcggcggagcggcgg
ctgcagccgggcggcaacgcgctggcggcgtgggaggccttgttcgaggaggcgcggggc
tgcacgcgctgccacctctacaagcatgcgacgcagacggtgttcggcgaggggccggtc
gacgcgccgctcatgttcgtcggcgagcagccgggcgatcaggaggatctggccgggcgg
gccttcgtcggcccggcgggccagctgttcgacaaggcgctgaaggaagcggggatcaac
cgcgccaaggcctacatcaccaacgcggtcaagcatttcaagttcgagccgcgcggcacc
cgccgcatccaccagacgcccaaggcggacgagatcaaggcgtgtcattattggtacgac
cgggagcgcgcgctgatccgcccgcaagtgacggtcgcgctcggcgccaccgccgcccgg
caagtgttcgggcgtgccgtcaccatctccagcttgcgcggggaggcgcataagctggcg
gaaggcggggaggcgtgggtgacggtgcatcccagcttcctgctgcgcgtgcgcgacaat
cgggaggcggaatatcagcggttcgtggaggatttggcgcggatcggggagcgggtgaag
gcgctttcctag
DBGET
integrated database retrieval system
