Scleropages formosus (Asian bonytongue): 108924359
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Entry
108924359 CDS
T04919
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfm00536
]
108924359 (slit2)
Glycosaminoglycan binding proteins [BR:
sfm00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108924359 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
LRRNT
Laminin_G_2
Laminin_G_1
LRRCT
LRR_9
LRR_1
hEGF
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_3
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
108924359
NCBI-ProteinID:
XP_029114806
LinkDB
All DBs
Position
16:complement(9066746..9187384)
Genome browser
AA seq
1525 aa
AA seq
DB search
MRTLRSSTFWMGLLVVAWGAVEPQPCPAQCSCTGTTVDCHGQGLRAVPRNIPRNAERLDL
NGNNLTRITKSDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQVFPELL
FLGTAKLYRLDLSENQIQGIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTL
NNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCNVAWLSDWLRQRPRLGLYTQCMGPPHM
RGHNVAEVQKKEFVCTGHQSSSSCSVLQCPDSCTCSNNIVDCRGKGLAEIPTSLPETITE
IRLEQNAIRVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP
KGLFEGLFALQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFASLRAIQT
LHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTEDY
RSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTRFPEHIPQYTAELRLNNNEFTVLEATG
IFKRLPQLRKINLSNNKITDIEEGTFEGAAGVNELILTGNRLENVHFRMLKGLNGLRTLM
LRSNRITCVSNSSFTGLSSVRLLSLYDNQITSMTPGAFDTLHSLSTLNLLANPFNCNCHL
AWLGEWLRKKRVVTGNPRCQSPYFLKEIPIQDVAIQDFACDDGNDDNSCSPMARCPAECT
CLDTVVRCSNKGLRSLPKGIPKEVTELYLDGNQFTQVPQELSNYKHLTLIDLSNNQISTL
SNQSFSNMSDLLTLILSYNRLRCIPVKAFDGLKSLRLLSLHGNDIAVIPEGAFQDLSSLS
HLALGANPLYCDCNMQWLSEWVKSGYKEPGIARCAGPGEMTDKLLLTTPSKKFTCQGPVD
VNILAKCNPCLSSPCQNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHACIANPCQNGGTC
HLKEGEAASFWCVCADGFEGEACEINIDDCEDNDCENNSTCIDGINNYTCLCPPEYTAIL
NEVEKGELCEEKLDFCAPELNPCQHDAKCLLTPTGYRCECTPGYVGEQCSVDFDDCQENK
CKNGAQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHECRNGAQCFVRGGDPE
CQCLQGYQGERCEKLISVNFVEHESFLQIPSSLISAQANISLQIATDEDNGILLYKGDND
HIAVELYRGRLRVSYDTGSSPPSAIYSVETINDGSFHLVELVAFEQTLSLSIDGGSPKSI
STLSKQSTLSIDSPLYMGGMPMKTNVAALRQGPGQNGTSFHGCIRNLYINSELQDLAQFQ
LQDGILPGCEPCQKTTCVHGTCHATGQSSFICECESGWAGTLCDQQTNNPCQGNKCIHGT
CLPINAFSYSCRCQPGFAGVLCDEEEEVFNPCQSIKCKHGKCRLSGLGKAYCECNSGYTG
EACDREIACRGERVRDNYQKQQGYAACQTTEKVSRLECRGGCSAGQCCGALRSKRRKYTF
ECTDGSSFVEEVEKVVKCGCTKCPS
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgttgagatcttccaccttctggatgggactcctggtggtggcgtggggcgcc
gtggagccccagccgtgcccggcgcagtgctcgtgcacgggcaccacggtggactgccac
gggcaggggctgcgcgccgtgccgcggaacatcccacggaacgcggagcggctggatctg
aatggaaataacctcacgagaattacaaagtcagattttgctggactgagacaccttaga
gttctgcaactcatggagaataagattagcaccatagagagaggtgccttccaggacctg
aaggagcttgagaggctgcgtctcaataggaataatcttcaggtcttccctgaactgctc
ttccttggaacagcgaagctctacagactagatcttagtgagaaccagattcaaggcatt
ccaagaaaagcattcaggggcgcagttgacatcaaaaatctgcagctggattacaaccag
atcagctgcatcgaggatggagcatttcgggctctgcgcgacctggaagtgctcacgctt
aacaacaacaacattacccggctgtccgtggccagcttcaaccacatgcccaagctcagg
acattccgcctgcactccaacaacctctactgcgactgcaacgtggcctggctgtccgac
tggctgcggcagagaccccggcttgggctctacacgcagtgcatgggacccccgcacatg
aggggccacaatgtggctgaggtgcaaaagaaggagtttgtgtgtacaggtcaccagtcc
tcctcgtcctgcagcgtcctgcagtgtcccgactcctgcacctgcagcaataacattgtg
gactgccgcgggaaaggactggcggagatccccaccagccttccggagactataaccgag
atccgcttggagcagaatgcaatcagggtcattcctcccggtgccttttccccatacaag
aagctgagaaggatagatctgagtaacaaccagatttctgaacttgcacccgacgctttc
cagggcctgcgctctctcaactcactagtgctgtatggaaacaaaatcacagaactcccg
aaaggactgtttgagggcctcttcgctctgcagttgctgcttcttaatgccaacaagata
aattgtctacgtgtggacgcatttcaagatctgcacaacctgaatctgctctcgttgtac
gacaacaagctgcagactattgccaaagggacgtttgcgtcactccgagctatccaaacc
ctgcacttggcccagaacccattcatctgtgactgccacctgaagtggctggcagactac
ctgcaggacaacccgattgaaaccagtggagctcgctgcaccagcccgcgccgtcttgcc
aacaagcgcatcggccagatcaagagcaagaagttccgctgctcaggcacggaggactac
aggtccaaactgggcggcgactgcttcgcggacctggcttgcccggaaaagtgccgctgc
gagggcaccactgtggactgctcgaaccagaagctcacacgcttccctgagcatattccc
cagtacacggctgagctgcgtctcaacaacaatgagtttacagttctggaagcgacgggg
atcttcaagagactgccccagctccgaaaaataaacctgagcaacaataagatcacggac
atcgaggaaggtacatttgagggggccgcaggggtcaacgagctcattctgacgggcaac
cgcctggaaaatgtccatttccgaatgctgaaaggccttaatggacttagaacgctgatg
ctgcggagcaatcgaattacctgcgtgagcaacagcagcttcacgggcctgagctccgtc
cgcctgctgtccctctacgacaaccagatcaccagcatgaccccgggagccttcgacacg
ctccactcgctgtcgacgctgaacctcttagccaaccctttcaactgcaactgtcacctg
gcctggctcggagaatggctgaggaagaagagggtggtcacgggcaatcctcgctgccag
agcccctacttcctcaaggagatccccattcaggatgtggccattcaggactttgcctgc
gatgatggcaatgacgacaacagctgctcccccatggcccgctgccctgccgagtgtacg
tgcctggacacagtagtccgctgcagtaacaaaggcttgaggagtctccccaagggcatc
cccaaggaggtgacagagctgtatctggatggaaaccagttcacccaagttccacaggaa
ctctctaattacaagcacttaacactcatcgatttaagtaacaaccagatcagcacgttg
tccaaccagagcttcagtaacatgtctgatctgcttactctaattttaagctacaaccga
ctgcgctgcatacccgtgaaggccttcgacggactcaagtcccttcggctcttgtccctg
cacggcaacgacattgcagtgattccggagggggcgttccaggacctgtcctcgctgtct
catctcgctctgggtgccaatcccctttactgtgactgcaacatgcaatggctctcggaa
tgggtgaaatccgggtacaaggaacccggcatcgctcggtgcgctgggcctggggagatg
acggacaagctgcttctcaccacaccatccaagaagttcacctgccaaggaccagtggat
gtaaacatcctcgccaagtgcaatccatgcctgtctagcccatgccagaacgacggcacg
tgcaacaacgaccccgtggatttctacagatgcacctgtccttacggatttaagggtcag
gactgtgacgtgcccattcatgcgtgcatcgcgaacccttgtcagaatggtgggacgtgt
cacctaaaagaaggcgaggccgccagcttttggtgcgtgtgtgccgatggcttcgaaggc
gaggcctgtgagatcaacatcgacgactgtgaggacaatgactgcgaaaacaattccacc
tgcatcgacgggatcaataactacacctgcctgtgccctcctgaatatacagctattctc
aatgaggtggagaaaggcgagctatgtgaggagaagctggatttctgtgccccggagctg
aacccctgtcagcatgatgccaagtgtctcctgacacctacaggataccggtgcgaatgc
acacctgggtatgtcggagagcagtgcagtgtcgatttcgatgactgccaggaaaataag
tgtaaaaacggggcccagtgtatcgacgcagtgaacggctacacctgtgtctgtccagag
gggtacagcggcttgttctgcgagttctccccgcccatggtgttgccccggaccagcccc
tgcgataaccacgagtgccgcaatggggcgcagtgcttcgtgcgggggggcgaccccgag
tgccagtgtctgcagggttaccaaggcgagaggtgcgagaagctgatcagcgtcaacttc
gtggagcacgagtccttcctgcagatcccgtcctcgcttatcagcgcccaggccaacatc
tcgctgcagattgctaccgatgaggacaacggtattctgctgtacaaaggtgacaatgac
cacattgcggtggagttgtaccgtggtcggctacgtgtgagctatgacaccggctcttct
ccgccttcggccatctacagtgtggagaccatcaacgacgggagcttccacttggtggag
ctggtggccttcgagcagaccctctctctgtccatcgatggtggtagccccaagtccatc
agcactctctccaagcagtccacgctcagcatcgactcgccgctctacatggggggcatg
ccgatgaagaccaacgtggcagcgctgcgccagggtcccggtcaaaatggcaccagcttc
cacggctgcatccgtaacctgtacatcaacagtgagctgcaggacctggcccagttccaa
ctgcaggatggcatccttcccggctgtgagccatgccagaagaccacctgtgtccatggc
acctgccatgccactggccagtccagctttatctgcgagtgtgagagcggctgggctgga
actctgtgcgaccagcaaaccaacaacccctgtcaggggaacaagtgcatacacggcaca
tgcctgcccatcaacgccttctcatacagctgcagatgccagccaggctttgcaggggtg
ctgtgtgatgaggaggaggaggtcttcaacccgtgccagtccattaagtgcaagcacggg
aaatgcaggctgtctggcctgggcaaggcctactgcgagtgtaacagcggatacacggga
gaggcctgtgaccgagaaatcgcttgtcgaggggaacgagtccgagataactatcagaag
cagcagggctatgccgcatgccagaccaccgaaaaggtctcgcggttagagtgccgcggc
ggctgctccgccggacagtgctgcggggcgctgcgaagcaagcggcggaaatacaccttc
gagtgtaccgacggctcctccttcgtggaggaggtggagaaggtggtcaagtgtggctgt
acaaaatgtccctcgtaa
DBGET
integrated database retrieval system
