Scleropages formosus (Asian bonytongue): 108928924
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Entry
108928924 CDS
T04919
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108928924 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108928924 (bard1)
04121 Ubiquitin system [BR:
sfm04121
]
108928924 (bard1)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108928924 (bard1)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108928924 (bard1)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108928924 (bard1)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
108928924 (bard1)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108928924 (bard1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
108928924 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
zf-RING_6
Ank_3
Ank_5
BRCT
BRCT_2
PTCB-BRCT
zf-RING_5
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108928924
NCBI-ProteinID:
XP_029113995
LinkDB
All DBs
Position
14:complement(24591438..24607941)
Genome browser
AA seq
750 aa
AA seq
DB search
MDSGSGDAGSRTPMWVETRRAVAEFRKLLLCSKCSRLMSDPVYLGTCEHMFCRRSCAGPC
AGSGCIVCHSPAWVKDLQINRQLSNITQLFRQLEALLNPLQLSSSPSIESSPQSARGGAA
KPKKNFKIWFSPRSRRIRCRVAKAVDKAPQALNARKKIPLPKPILGVSVPKDLSVFSFSS
SSQDSSSSHHPDSNTTDKMRKKVMKKKSTGKVSGADERCQPCKKPNKIAHKKKLEAINRQ
WGIKQGAESAGGEVLRLERPIRKVSFQCPTRCTTSTQGSEEHFQQGVDHQETPACLLGER
PGDCGKVEPLTGGEPGSPMALSLPDCQPSKQIRAQDNPDAQSTPKRPRRSSERVRPAGGR
KQPLSAPLPPPREEQPRASVSPRTPTVLKRNHKGETLLHLAAIKGDVPAVVQLLDQGADP
NLKDHAGWTPLHEACNLGHLGVAKVLLQKGALLNAPGYQNDSPLHDAVRNGHIDIVRLLL
EEGASPSMLNTFGLRPVDCAETEEMRAILQAAVDASDRRGTPLRSPGAVCKSGGPSQRKG
QITLLGSRLSPTQRKQLTELAQLLGGRSTDCFSNSVTHVIVPDATMPTTMSCFHGVLSGC
WILSFNWVLACLKAECWTGEGDYEVGDGPARSRINRDDLLPPLFDGCFFFFLGSFRSPSK
AELLELVKEGGGQVLARRPKPDSDVTQTLSAAAYHAPPGSDQALCTQYILYDPLGLYKPD
RVRLGKVWSAPSTWLLECISAFQLLPVPEL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggttctggtgatgcgggctcacggactccgatgtgggtagagacccgacgg
gctgtggcagagtttcgcaagctgctcctttgctccaaatgctcgcggctgatgagcgat
cccgtgtacctgggcacgtgcgaacacatgttctgcaggaggtcctgcgcgggcccttgc
gccggctccggctgcattgtgtgtcacagccctgcttgggtgaaggacctccagatcaac
cggcagctcagcaacattacgcagctgttccgccagctggaggcgctgctcaaccccctc
cagctctcctcctccccgtccattgagtcgtccccacagtcagcgaggggtggcgctgcc
aagcccaagaagaacttcaagatctggttcagcccgcggagccgcaggattcggtgccgg
gtagccaaagcggtggacaaggccccccaggcactaaacgctaggaagaaaatccctttg
ccaaaaccgatcctgggtgtgtccgtgcccaaagatctgtctgttttcagctttagctcc
tcctctcaggactctagctcctcccaccaccctgacagtaacactactgacaagatgagg
aagaaggtgatgaagaaaaagagcacggggaaggtgtctggagcagatgaaagatgtcag
ccatgtaagaagccgaataaaattgctcacaagaagaaactggaggccattaaccggcaa
tgggggataaagcagggggcggagtctgcgggaggggaggtcctgaggctggagaggccc
attcggaaggtgtccttccagtgccctactcgatgcaccacctcaacccaggggtcagag
gagcattttcagcagggggttgatcaccaggagaccccagcctgccttctgggggaacgt
ccaggtgattgtgggaaggtggagccattgacggggggggagcctggttccccgatggca
ctttcactccctgattgccagccttccaaacaaattcgagcccaggacaacccggatgct
cagagcaccccaaaaaggccgaggaggtcgtcggagcgagtgagaccagctggtgggaga
aaacaacccctgagcgccccgctgcccccacccagggaggagcagcctagagcatcagtc
tctccacgcaccccgactgtcctcaagaggaaccacaagggggagacacttctgcatctt
gcagccataaagggggacgtcccggctgtcgtacaactcctggaccaaggggcggatccc
aacctcaaggaccacgcgggttggactcccctgcacgaggcatgtaacctcgggcacctg
ggtgtggccaaggtgctgctccagaagggggcgctgctcaacgctccgggctaccagaat
gactctccactgcacgacgccgttcggaacggacacatcgacattgtgcggctgctgctg
gaggagggcgcctccccgagcatgctgaatacgtttggacttcgccccgtggactgcgcc
gagactgaggaaatgcgggcgatcctccaggctgccgttgacgcgtcggaccgccggggc
acccccctcaggtccccgggagctgtgtgcaagtcgggaggcccttctcagaggaaaggc
cagatcactctcctgggcagccgactgagtccgacgcaacggaagcagctgaccgagctg
gcccagctcctgggaggacgcagtaccgactgcttctctaactcggtgacgcacgtcatc
gtacccgatgccaccatgcccaccaccatgtcctgtttccatggcgtcctgagcggctgc
tggatcctgagcttcaactgggtactggcatgtctgaaggctgagtgctggacaggggag
ggtgactacgaagtgggagatggccctgcgcggagccgcatcaaccgagacgacctgctg
ccacctctcttcgacggctgtttcttcttcttcctgggctcttttcggagcccctcgaag
gcggagctgctggagctggtgaaggaaggcggggggcaggttctggcccgcaggccgaag
cccgacagtgacgttacacaaactttgagtgcggcggcctaccatgccccaccgggctcc
gaccaagcgctctgcacccaatacatcctgtacgatccgctgggcctctacaaaccggac
cgggtgcggctgggcaaggtgtggagtgccccgtccacctggctgttggagtgcatctcc
gccttccaactgctccctgttccagaactatag
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