Scleropages formosus (Asian bonytongue): 108929612
Help
Entry
108929612 CDS
T04919
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108929612 (chd7)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108929612 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HDA2-3
Motif
Other DBs
NCBI-GeneID:
108929612
NCBI-ProteinID:
XP_018599788
LinkDB
All DBs
Position
9:complement(25431017..25490345)
Genome browser
AA seq
3073 aa
AA seq
DB search
MADPGMMSLFGDDANLFSEGLEGLGECGYSESQVNPLGQPMPMDQGYLHHPTQAAPGQPQ
PKLGHFDHFSQYEQQKMHLMDQQGGSRMLGGAPGNGMSSPHSQYHSPATPVSHGGGGHPA
YTGLQGDRHNQQFIDSGSMWGPRAVQVPDQVRPPFQQPQQVSPQQSGPSGPPGHMQQMGP
YMPRGEYPMQAHSQMPTPPRINHFSQGLPPEGGRPPGSNHFMGSMGPQPGAGMVGNPMRH
PVQQQQPQQQQPQQQFHHRPAPGSIHPDTVVHNPRFSPSPSQQQQGPPAQQQAPGRPQQN
MGFNPRNPSAQPNAVNNSGQYAPYSPYGASHNQGLVNSTGMGPGLGLAAGGAPMPQVSRY
PGTGFPSGAPQGLMHQQPMLANQINSQAMHPSQQQSPAKQQPPPHQGPYGSSSPMSPLKA
ISNPAGTPPPPQQVRPPSAGMAMDVGGYPSMPHQPSGAMGLSQRSMGPRSMAQQQPGPQP
YMGLSPSQRDMTGPLRPPGGLGGNHMDAQAMQDQRILSAPPHPPQHPGQPLPAPLPFQKQ
QQQHLQACAPMQQQPPQAHLSIHHQTSPHHQPWAQQHSSPPTTQKVPVQQPSPSDPSVET
LASDKMAAMGPNPQTPSSSGQPAEGEQKPKKKKKKKAKGSSEEEEGVQGAGELPVDSLGL
VGSPAGKQSAEEGKKKKNNPKEKKEPKTPKEPKIPKTPKEPKEKKVKTTMPKTKSAKKPS
GKKTSDTDVSSGKKETKRKRESSDNSDTERTPPASPEEDGDLGVQKRRSSRQVKRKRYTE
DLEFRISDEEAEEDDGSVQKSPSNASQSEQQEAPDAEGPVVEKIMGIRMSKKKMESGEVE
VEEFYVKFKNFSYLHCRWADIEELEKDKRIHQKVKRFKAKQSLNSFLTEMDDEPFNPDYV
EVDRILDVSKITDNGESVTHYLVKWCSLPYEDSTWELKADIDQAKIEEFERLMAREPKLT
RVERPPASDWQKSESSREYKNGNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS
ITFLYEIYLKGICGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQAYEMNF
RDSQGRVIKGAYKFHAVITTFEMILTDCPELRNIQWRCVVIDEAHRLKNRNCKLLEGLKM
MDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSESTFMQEFGDLKTEEQVQKLQGILK
PMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGGGNANVPNL
LNTMMELRKCCNHPYLINGAEEKILDEFRETHHSEFPDFHLQAMIQAAGKLVLIDKLLPK
LKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFV
FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYE
REMFDKASLKLGLDKAVLQSMSGRENASNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSK
FCEEDIDQILQRRTQTITIESEGKGSTFAKASFVSSGNRTDISLEDPDFWQKWAKKAELD
MDVIHGRNNLVIDTPRVRKQTRHYSSVKEDEMMEFSELESDSDDRPVPKPRRPLDKSQGY
PRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALLVYCLHHYRGDENIK
SFIWDLITPTEDGQTRALLNHSGLSAPVPRGRKGKKVKSQAAQPYTRQADWLANCNPDTL
LQEDSYKKHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGADSSEIDIWIPQPFHAEV
PTDWWNREADKSLLIGVFKHGYEKYNSMRADPTLCFLERVGMPDAKAIAAEQRGADMMAD
GADGGDFDREEDDPEYKPARMAFKDEMDEFADSPLDDKEEPLDAESLGKPSESQDFGTLY
WPGSSALTTRLRRLITAYQRSYKREQMRQEALTKTDRRRRRPREEVRAMVAEREAIITER
RQKWTRREEADFYRVVSTFGVVYDVRKHRFDWNQFRAFARLDKKTDESLEKYYYSFVAMC
KRVCRMPIKPNEEPPDPTILMEPITEERASRTLYRIELLRRIREQVLPHPELEARLRLCQ
PSPELPEWWECGRHDRDLLLGASKHGVSRTDYHILNDPALGFLEAHRRFAQAKGVNSSLP
TAQGPPLTPAALVKKEEEGQEPLLPTKVEDEEALEGEEKEEPEKEESKAYSPKAGVKDEK
EMEQPSEQEDKEQPSNVKSEEEGSIPVKAKQESEEPEGQESKEPEGQENAEVLAASESKS
LSEKGSEEDEDDKMDEDYKSEESSHAEAGTTSQGKNFDEESNASLSTTRDGFYIEDGGES
AAQAFHERSFSFSFWPKDRVMINRLDNICEAVVKGKWPVNRRQVLDFPSIMPGYGTPAAD
SPLQRRSFAELSMVGQANYSGSEDVTLSPKMSKDEMLSMTVPRQRRRRRRKVEIEAERAA
KRRNLMEMVAQLRESHATDGHERAMDLTKALREATTSTSNLSSKFLLPSASTPPSDAFKT
QMELLQAGLSGTPNRHLMNGSFLEGDLPVRRRRGRRKNVEGLDLLFMGNKRAALNAEDSE
VTKAFVEGVHLPPQAQRNIPSPGQLDPNTRVPVINLKDGSRLVGEDAPTNKDLVEWLNQH
PTYIVDMPSYVPKNEDHLLSPFQKPKQKRHRCRNPNKIDINTLTGEERVPVVNRRNGKKM
GGAMAPPMKDLPRWLEENPEFAISPDWTDIVKQSGFLPESMFDRLLTGPVVREEGARRRG
RRPKSEITRAAAQAAAAAAAAAASSSGINPLLMSSLFGGMDLASLQNLQSLQSLQLAGLM
GFPPGLAAAAGGDAKHASTMLPLMLPGMAGLPNMFGLGSLFNNLTSAAAAVSAGGTSAAG
QTEPEEASAAVTEEKKSEEEAEQKEPEKAPEASAEANGETSINSAAAAAAAAAAASMSTN
PLAFNPFLLSTMAPGLFYPSMFLPPSLGGLALPGFNQASLAGLQGAVTGAEAGAGATGGE
EEEEEEKETGADPAAKAQAEVADGDNTLEDSDTDESQNKTAESSVLEDELGPAEELDSLD
GGEDAEEDEDNGD
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccggcatgatgagcctgttcggggatgacgccaacctgttctcagagggg
cttgagggcctgggggagtgcggctactcggagagccaggtgaaccctcttggccagccc
atgcctatggaccagggctacctccaccacccaacacaagcggcccccggccagccgcag
ccaaagctcggccacttcgaccacttcagccagtacgagcagcagaagatgcatctgatg
gaccagcaaggtgggagccgcatgttgggaggtgccccgggcaatggcatgtcctcccca
cactcgcagtaccatagccctgctacaccagtctctcatggtggtggtggacacccagcc
tacacaggtctccagggggaccgtcacaaccagcagtttatcgacagtgggtctatgtgg
ggacctcgagcggtgcaagtacctgaccaagtgcgccccccattccaacagccgcagcag
gtatccccccagcagtctggaccttctggacccccaggtcacatgcaacagatgggccca
tatatgccacgaggggagtaccccatgcaggcgcatagccagatgcctaccccaccaagg
ataaaccacttttcccagggcctgccaccagagggtggccggcctccaggctccaaccac
ttcatgggcagtatgggtccgcagccgggcgccggcatggtgggcaacccgatgcgccac
cctgtgcaacagcagcagccccaacagcagcagccgcagcagcagttccaccatcggccc
gcaccaggctccattcaccccgacacagtggtccacaaccctcgcttttcacccagccca
tcacagcaacaacagggtcccccagcacagcagcaagcgccagggagaccccagcagaac
atgggctttaatcctcgcaacccatcggcacaacccaacgcggtgaacaactcagggcag
tacgcgccctactccccgtacggcgccagccacaatcagggattagtgaacagcaccggc
atgggccctggcctgggtctggctgctggtggagctcctatgccgcaggtgtcacgctac
cctggtactggtttcccttccggtgcaccgcagggccttatgcaccagcagcccatgctt
gccaaccaaatcaactcccaagctatgcacccttcccagcagcagtcgccggcaaagcag
cagccacccccgcatcagggcccctacggttcctcttcacccatgtcccccctgaaggcc
ataagcaatcctgccggcacacctcccccaccgcagcaggtgcgccctcccagtgctgga
atggcaatggatgtgggcggttaccccagcatgccacatcagccttctggggccatgggg
ctgtcccagaggagcatggggccacgaagtatggctcagcagcagcccggtccccagccc
tacatgggtctgtcacctagccagagggacatgactggcccactgaggcccccaggtggt
cttggggggaaccacatggacgctcaggccatgcaggatcagcggatcctctcagcccca
ccacacccacctcagcacccagggcaacccctcccagccccgctgcctttccagaaacag
caacagcagcatctgcaggcatgcgcccctatgcagcagcagccaccgcaggcacatctg
tcaatccatcaccagacttccccacatcaccagccgtgggcgcagcagcactcgtcgccg
cccaccacccagaaagtgcctgttcaacagccttcgccatcagatccatcagttgagaca
ttggcctctgacaagatggctgccatgggccccaacccccagaccccaagtagcagcggg
cagccagccgagggtgagcagaagccaaaaaagaagaagaaaaagaaagctaaggggagc
tccgaggaggaagaaggggtccagggtgcgggggagctcccggtggacagcctgggtctt
gtgggtagccctgctggcaagcagtcagcggaggaaggtaagaagaagaagaacaacccc
aaagagaaaaaggagcccaagacccctaaggagcccaagataccgaaaacacctaaagag
cccaaggagaagaaggtgaagacaacgatgccgaagaccaagagtgccaagaagcccagt
ggtaagaagacatctgacactgatgtgagctctgggaagaaggaaactaaacgcaagcgg
gagtcttcagacaactcggacacagagagaaccccacctgcttcgccggaggaggatggc
gatctgggtgttcagaagcgacgctcaagccgtcaggtgaagaggaaacgctacacagag
gacctggagttcaggatctctgacgaggaggccgaggaggatgatggcagtgtgcagaag
tccccatcaaatgcatcccagtcagagcagcaggaggcacctgatgcggaaggccctgtt
gtggaaaaaatcatgggcattcggatgagcaagaagaagatggagtctggagaagtggaa
gtcgaagaattctacgtcaaattcaagaacttctcgtacctgcactgccgctgggcagac
atagaggagctggagaaggacaagaggattcaccagaaagtgaagcggttcaaggccaag
cagtcgctcaattctttcctcacagagatggatgacgaaccattcaacccagattacgtg
gaagtggatcggatccttgacgtgtccaaaatcacagacaatggagagtctgtcactcac
tacctggtgaagtggtgctccctcccctacgaagacagcacctgggagctgaaggccgac
attgatcaggccaagatcgaggagtttgagagactcatggccagagagcccaagctgacg
cgggtggagcgacctcccgccagcgactggcagaaatccgagagttccagggaatacaaa
aatggcaacgcactcagggaataccagctggagggagtcaattggctgctcttcaactgg
tacaacacacgcaactgtatactggcagatgaaatgggactaggaaaaactatccagtcc
ataacattcctttacgagatatacttgaaggggatttgtggccctttcctggtcattgct
cccctgtccaccatccctaattgggaaagggagttccgtacctggacagagctcaacgtg
gtggtgtaccatggtagccaggccagtcggaggaccattcaagcctacgagatgaatttc
agggactctcagggtcgcgtgataaagggagcctacaaattccatgctgtcatcaccaca
tttgagatgatcctgacggactgcccggagctgcggaatatccagtggcgctgtgtggtc
atagatgaggcccaccgtcttaagaacaggaactgcaagctgctggaggggctcaaaatg
atggacatggaacacaaggttcttctcactgggacgcctctgcagaacactgtggaagag
ctcttcagcctgctcaacttcctggagcctgagaggttcccttcggaatctactttcatg
caagaatttggagatctgaaaactgaagaacaggtgcaaaaacttcagggcatcctgaag
cctatgatgctgcgcagactgaaggaagatgtggagaagaacttagcccccaaagaagag
accatcatcgaggtggagctcaccaacatccagaagaagtactaccgggccatcctagag
aagaactttgctttcctgtccaaaggcggtggtgggggaaacgccaacgtgccgaacttg
ctgaacactatgatggagctgagaaagtgctgcaaccatccttatcttattaatggtgca
gaagagaaaatcctggatgaattcagggagactcatcattcagagtttccagattttcac
ctccaggcgatgatccaggctgctggaaagcttgtactgattgacaagctgctgccgaaa
ctgaaggccggcggccacagagttctcatcttctcccaaatggtgcgctgcctggacatt
ttggaggactacctcatccagaggaggtacccgtatgagcgcattgacggcagagtgagg
ggcaatctccgacaggcagctatagaccggttttcccggcctgattcggaccgctttgtc
ttcctgctgtgtaccagagccggtggcctgggcatcaacttgacagcagctgacacttgc
atcatctttgactcggactggaaccctcagaatgacctgcaggctcaggccaggtgccac
cggattgggcagagcaaggctgtaaagatctaccgcctgatcaccaggaactcgtacgag
agggagatgttcgacaaggccagcctgaagctgggtctggacaaggctgtgctgcagtcc
atgagtggcagagaaaatgcttcaaatggggtccaacagctgtccaagaaggagattgag
gacctccttcgcaagggagcctatggggcactgatggacgaggaagacgagggctccaaa
ttctgtgaggaagacatcgaccagatcctgcagagacgaacgcaaaccattacaattgag
tctgaagggaaagggtccacttttgccaaggcgagctttgtgtcctccggcaacaggacg
gacatttcactggaggaccctgatttctggcagaagtgggcgaagaaagcagaactcgat
atggacgtaatccatggaaggaacaacctggtaattgacacgccacgggtccgaaagcag
acccgtcactacagctcggtgaaggaggatgaaatgatggagttctctgagctggagagt
gactcagacgacagacctgtgccgaagccacgccggccactggacaagtctcagggctac
ccacgcagcgagtgcttccgagtggagaagaacctgctggtctatggctggggccgctgg
ggagacatcctgtcccatggacgcttcaagcgtcccctcagggagcaggacgtggagacc
atctgcagggcgctgctggtctactgcctccaccactacaggggcgatgagaacatcaag
agcttcatctgggacctgattacacccacggaggacgggcagacccgtgcccttctcaac
cattccgggctgtctgctccagtgccccggggccggaagggcaagaaggtgaagagccag
gcagcgcagccctacacaaggcaagcagactggctggccaattgcaaccctgacaccctg
ctccaagaggacagctacaaaaagcacctgaagcaccactgcaacaaagtcctgctgcgg
gtccgcatgctctactatctcaggcaagaagtcatcggcgaccaggcagacaggatctta
gagggcgctgattcaagtgaaatagacatttggatcccacaaccattccacgctgaagtg
cctactgattggtggaacagagaggcggacaaatcccttctcatcggagtcttcaaacat
ggctatgagaagtacaactcaatgcgtgcagacccgaccctgtgcttcctggagcgagta
ggcatgcctgatgccaaggccatcgctgcagagcagaggggagctgacatgatggcagat
ggtgctgatgggggtgattttgaccgagaagaggatgaccctgagtacaagccagccaga
atggccttcaaagatgaaatggatgagtttgcagattcaccgttggatgataaggaagag
cccctggatgctgaaagcttaggcaagcctagtgagagtcaggactttggtacgctctac
tggcctggcagctcagcactgaccacgcggcttcggcggctcatcacagcctaccagcgt
agttacaaacgggagcagatgcgtcaggaggccctgaccaagacagaccgcaggaggcgt
cgacctcgggaggaggttcgcgccatggtagctgagagggaggcaatcatcacagagcgc
aggcagaagtggaccaggagggaggaggcggacttctaccgtgtagtgtccacctttggt
gtcgtgtatgatgtccgcaagcatcgttttgactggaaccagttccgggccttcgccaga
ctggacaagaagacagacgaaagcctggagaaatactactattcctttgtggccatgtgc
aaacgggtgtgtcgcatgcctatcaaacccaatgaagagcccccagatcccaccatcctc
atggagcccattacagaagagcgtgcctcgcggacactctaccgcatcgagctgctgcgc
cgcatccgtgaacaggtgctgccacaccccgaactggaggcacgcctccggctatgccag
cccagccctgagctgcccgagtggtgggaatgcggccggcatgaccgcgacctgctgctt
ggagcttccaagcatggagtcagccgcacagactaccacatcctcaatgaccctgcgctg
ggcttccttgaggctcaccgccgtttcgctcaggctaagggtgtgaacagttccctgcct
acagcccaggggcctcctctcacccccgctgcccttgtcaagaaggaagaagagggccaa
gagcctctgctgcctaccaaggtggaagacgaggaggcccttgagggtgaagagaaggag
gagcccgagaaggaagaaagcaaggcttactctcctaaagcaggggtgaaggatgagaag
gaaatggaacagcccagtgaacaggaggacaaggagcagcccagcaatgtcaagtctgag
gaagagggcagcattccagtgaaggccaagcaggaaagcgaggaaccagaggggcaggaa
agcaaggaaccagagggacaggagaacgcagaagtgcttgcagcctccgagtctaagtct
ttgtctgagaaaggctccgaggaggacgaggatgataagatggacgaggattataaatct
gaggaatcttctcatgctgaagctggcaccacctcccaggggaaaaactttgatgaggaa
agcaatgcctccctcagcaccacacgtgatggcttctacattgaagatggcggggagtcg
gctgcccaggctttccatgagcgttccttctccttctccttctggcccaaggaccgggtg
atgataaaccgattggacaacatctgtgaagctgtggtcaagggcaagtggcccgtgaac
cgacgccaagtcctggacttcccgagcataatgcctggttatgggacccctgctgctgac
agccccctccagagacgcagctttgccgagctgtctatggtgggccaggccaactacagt
ggcagtgaggatgtcaccttgtccccaaagatgtccaaggatgagatgctgagcatgact
gttccccgacagcgccggcgccgaaggaggaaggtggagattgaggcggagcgggcggcc
aagcgcaggaatctgatggagatggtggcgcagctgagggaatcccatgccaccgacggc
cacgagcgggccatggacctgactaaagccctgcgggaggccaccacttctacctcaaac
ctctcttccaagtttctcttgcccagcgcctccaccccgccctctgatgcctttaaaact
cagatggagttgctgcaagcaggtctctcagggacccccaaccggcacctcatgaatggc
tcctttctggagggggacttgcctgtgagaaggagaaggggccgccggaaaaatgtggag
gggctagaccttctcttcatgggcaacaaaagggcagcactgaatgctgaggactcagaa
gtgaccaaagcttttgtggagggagtgcacctaccgccacaggcccagaggaacattcca
tcccccggccagcttgacccaaacactcgcgtccctgtgatcaacctgaaggacggcagc
cggctcgttggtgaagacgctcccaccaacaaggacctggtcgagtggctcaaccagcac
cccacctacattgttgacatgccaagttatgtaccaaagaatgaggaccatctcctctcg
ccgttccagaagccgaagcagaagaggcaccggtgtcgcaatcccaacaagatcgacatc
aacacactgaccggggaggagcgggtgccagtggtgaaccgtaggaatggaaagaagatg
ggaggagcaatggccccccccatgaaggacttgccaaggtggcttgaagaaaacccggag
tttgcaatatccccagactggacagacattgtcaagcaatcgggcttcctcccagaatcc
atgtttgaccgccttctcactgggccagtggtgcgggaggagggagccagacgcagaggc
aggagaccaaagagtgagatcacccgggcagcagcgcaggcagcagcagcagcagccgcc
gccgccgcctcttcctcaggcatcaaccccttgctgatgagcagcctgtttggtggcatg
gacctggctagtctgcagaacctccagagcctgcagagcttgcagctggccggcctcatg
ggcttcccaccgggcctggctgctgcagccggtggcgacgccaagcacgcctccaccatg
ctgcccctcatgctgcccggcatggctgggctgcccaacatgtttggcttgggcagcctc
ttcaacaacttaacgtctgcagctgctgcagtgtctgccggcggcacctctgctgccggc
cagactgagcccgaggaagcgtccgcagctgtgaccgaggagaagaagagcgaggaagag
gcagagcagaaggagccggagaaggcccccgaggcctcggccgaggcgaacggggagacc
tctatcaactcggcggccgccgcagcagcagctgctgcagccgccagcatgtccacaaac
cccttggccttcaaccccttcctgctgtcaacgatggccccaggtcttttctacccctcc
atgttccttccccccagcctgggtggcctggctctgccaggcttcaaccaggcctcgcta
gccggactgcagggtgccgtgacgggagcagaggccggggctggcgccacagggggggag
gaggaggaggaggaggagaaggagaccggcgccgaccctgctgccaaagctcaggccgag
gtggcagacggggacaacacactggaggacagcgacacggacgagagccagaacaagacg
gccgagtcttcggtgctggaggacgagctgggcccagctgaggagctggactccctcgac
ggaggagaggatgcagaggaagatgaggacaacggagactag
DBGET
integrated database retrieval system
