Scleropages formosus (Asian bonytongue): 108933647
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Entry
108933647 CDS
T04919
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108933647 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108933647 (taf5l)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108933647 (taf5l)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108933647 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
108933647 (taf5l)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108933647 (taf5l)
STAGA complex
108933647 (taf5l)
TFTC complex
108933647 (taf5l)
SAGA complex
108933647 (taf5l)
SLIK complex
108933647 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
NBCH_WD40
ANAPC4_WD40
RMC1_N
Nup160
PROPPIN
Ge1_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
108933647
NCBI-ProteinID:
XP_018606348
UniProt:
A0A8C9TF26
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All DBs
Position
16:17319723..17325797
Genome browser
AA seq
594 aa
AA seq
DB search
MKRVRTEQIQYTVAQYLKRRQYVDTESSLKGAKLSHSAEEMAANLTVQSESGCTNVVSAA
PCQADPLQYEKQFAKLRNFLAEAEVPWGQEVSCLLYPLFVYLHLDMVRCGLKNAVDSFHT
RFQGLFLQNAEQKETVELLRHVLAVQDVSSNPKLSAFLDHKYVVHLTDPAYSYLLRYLQS
ADNSALCRVLSAHVQVEVTAVQRMDYQLYGGGACGGSSSRGVDAGEGLDPGDITSSIFQN
EAAMESLQDCIRRVKDGPPSLTTVCFYAFHHTDQLLNTAEISADSKLLAAGFDNSSVKLW
SLRARKLKAEPHTVDVSSIHLACDILDEEADDEDSAGSEMKILRGHCGPVYCTAFLTNSS
GLLSCSEDTTIRYWNLNSFTNTVLYQGHAYPVWDVDISPCSLYFASSSHDRTARLWTFSR
TYPLRLYAGHLADVDCVKFHPNSNYVATGSTDKTVRLWSTQQGSTVRLFTGHRGPVLSLA
FSPNGKYLASAGEDQRLKLWDLAAGTLFKDLRGHTDTITSLSFSPDSSLVASASMDNSVR
VWDLRTSHTSTTADGTSNELVGIYTGNTSNVLSVQFMACNLLLVTGTAQEKQEH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtgaggactgagcagatccaatacacagtggctcagtacctgaagcggagg
cagtatgtggacaccgagagttccttgaaaggagctaaactttctcactccgctgaagag
atggcagctaaccttacagttcagtcagagtctggctgtaccaatgtggtctctgcagct
ccgtgtcaagcagaccctctgcagtatgagaagcagtttgccaaactgcggaactttctg
gctgaggcagaagtgccatggggccaagaagtgagctgtctgctgtatccgctgtttgtc
tacttgcatctcgacatggtgcgctgtggactaaaaaatgctgtggacagttttcacacc
cgcttccagggcctctttctacaaaatgctgagcagaaggaaaccgtggagctgctgcgc
catgtacttgccgttcaagatgtctcttccaaccctaagctctctgcatttcttgaccac
aagtatgtggtgcacctgactgatccagcatacagctacctcttacgctacctccagagt
gctgacaactctgccctctgtcgggttctaagtgctcatgtgcaggtagaggtaactgca
gtccagcgcatggactaccaactgtatggagggggtgcttgtgggggatcttcctcacga
ggggtggatgctggggaggggttggatccaggcgatataacctccagcatctttcagaat
gaagcagccatggagtcacttcaggactgtatcaggcgggttaaagatgggccaccatcc
ctcaccactgtctgcttctacgccttccatcataccgaccagctccttaacactgctgag
atatctgccgacagcaagttgctggctgctgggtttgacaattcaagtgtcaaattgtgg
agcttacgggcacgcaagttaaaggctgagcctcacaccgtggatgtatcatctattcac
cttgcctgtgatattctggatgaggaggctgatgatgaggacagtgctggcagtgagatg
aagattcttcggggccactgtgggccggtgtattgtactgccttcctgaccaatagctca
ggcctactgtcctgctctgaggacaccaccatccgctactggaacctgaacagcttcacc
aatactgttctctatcagggtcatgcttacccagtctgggatgtggacattagcccttgc
agtctgtactttgccagcagctctcatgacaggacagcccgactttggaccttcagtcgc
acataccctttaaggctgtacgctggccatttagctgatgtagactgtgtcaagttccac
ccgaactctaattatgtggccactggctcaactgacaaaactgtgcgtctgtggagcact
cagcagggtagtactgtgcgcctcttcacaggccaccggggccctgttctctctttagcc
ttctcccccaatggtaagtacctagcttcagctggtgaggaccagcgtctcaagttgtgg
gacctggctgcagggacactgttcaaggacttgcgtggccacacggacacaatcactagc
ctgtccttcagtccagatagtagtttggttgcttctgcttccatggacaactcagttcgt
gtctgggacctgcgcacctcccacaccagcaccactgcagatggtacctctaatgagctg
gtaggtatttatactggaaatactagcaatgtactgagtgtgcagttcatggcatgcaac
ttgctgctagtgacaggtacagctcaggagaaacaagaacactag
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