Scleropages formosus (Asian bonytongue): 108934768
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Entry
108934768 CDS
T04919
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04020
Calcium signaling pathway
sfm04260
Cardiac muscle contraction
sfm04261
Adrenergic signaling in cardiomyocytes
sfm04270
Vascular smooth muscle contraction
sfm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108934768
04020 Calcium signaling pathway
108934768
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108934768
09153 Circulatory system
04260 Cardiac muscle contraction
108934768
04261 Adrenergic signaling in cardiomyocytes
108934768
04270 Vascular smooth muscle contraction
108934768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108934768
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108934768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
Glyco_hydro_cc
Motif
Other DBs
NCBI-GeneID:
108934768
NCBI-ProteinID:
XP_018608362
LinkDB
All DBs
Position
1:complement(9443032..9480627)
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AA seq
2133 aa
AA seq
DB search
MYDETRKKNGYSNTSEAEGGGGEEEEEEEGAEGDEGGGDRKKGLPWQDSEEMEGEGGMRM
NRTDTLNSTTSSTGTQRKKSTHAKKQIQGANTVQRAPRALFCLRLNNPIRRAALSIVEWK
PFDVFILLAIFANCVALGVSKPFPEDDSNATNHDLEQVEYVFLIIFTVETFLKILAYGLV
MHPSSYIRNGWNLLDFVIVIVGLFSVVLETVTHKPGEAHHMAGKPGGLDVKALRAFRVLR
PLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCYYTST
DLFVEDDPVPCAFAGHGRQCMINGSECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGW
TDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLR
EKQQMEEDLCGYMDWITQAEDIDEEDEDGNRHVTLGDLADKKRGKFGWFSHSSETHASLP
ASETASETTENIEEEHTDCCASCCAKIMKNRLCRTLRRWNRACRRNCRVAVKSVTFYWLV
LLLVFLNTVTSASEHYNQPDWLTQVQDIANKVLLSLFTVEMLLKMYSLGLQGYFVAFFNR
FDCFVVCGGIMETILVEMEIMPPLGISVLRCVRLLRIFKVTRHWNALSNLVASLLNSMKS
IASLLLLLFLFLIIFALLGMQLFGGKFNFDEAQTKRSTFDAFPQALLTCFQILTGEDWNV
VMYDGIMAYGGPYFPGMIVCIYFVILFICGNYILLNVFLAIAVDNLAGGDGDDNKKEEKK
DGEGTESEETKVDMDEYEEEEEPEEGEEGEGRVQINVADFTPPKEKVLPIPEGSAFFCLS
KTNPIRVGCHTLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNQVLGYADYAFTSIF
TVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSAISVVKILRVLRVLR
PLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCNDEAKY
TPEQCKGTFVVYKDGDVTQPMVKDRVWHNSDFNFDNVLMGMMALFTVSTFEGWPALLYKA
IDANGENKGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFREQGEQEYKNCELDK
NQRQCVEYALKAQPLKLYIPKNPVQYRFWSIVNSTAFEYIMFVLILLNTVTLAVQHYDQS
KTFNYTMDILNMVFTGLFTVEMVLKILALRPKHYFIDAWNSFDALIVVGSVVDIVVTEFS
SSEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSLQALPYVALLIAMIFFIYA
VIGMQTFGKIAMQDLTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDPES
DYEPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEF
KRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVT
FNATLFALVRTALKIKTEGNPDQENEELRIIIKKIWKRMKPKILDEVIPPAAEEEVTVGK
FYATFLIQDYFRKFRKRKEKGVLGDPDTNNSSALQAGLRTLQDLGPEMRLAMSCDLEEEE
EEEGLEEEPEEDETHYKSNGVFPGHGDAVSKDRRGSVASPASSTPGPLGEALSNGVAHRS
SVMGLSKTPNGSGVQEDPRGAEDDRAPSHHRRGSHRRHSSVRNGLVDQPPKAISNRRVCL
QSHGHGAKWDDVERKRFSHTVNSSENMFVMFRYGKACFCTILSSSRVRYYNKYLRRDSGD
VYDSPSGRHDGRTEAGEERYPGEQGYYRREEDAESPVLRDRHLYADSTPMHPGHHEHMYN
AHPPGHVLYNNHYGNGYGEGRRTARRRLLPATPTGRKPAFNIQCLRRQGSSDDLPIPGTY
HQNSPPCRARTQTYGSYDSRRSSTRSSTSSTASWANPGPRRSRLLYAPLILVEEEGAGAG
GLVWGDKKSNEASLPASAQPGWYTGSGNGGGPQPYRAYTTLRVPTQLSPHYSDKRGSADS
LVEAVLISEGLGLYAKDPKFVAFAKREIADACHMTIDEMESAASDLLSRGSGGGGGGGFL
NHPDVGTLYSDEEPIRSRDEEELADEMTCVTSF
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgaaacacgcaaaaagaatgggtactccaataccagcgaagcagagggcggt
ggaggtgaggaggaggaggaggaagagggagcggagggcgacgagggagggggcgacagg
aagaaaggcttgccgtggcaggactcggaggagatggaaggagaaggagggatgcggatg
aataggaccgacacgctcaactccaccaccagctccacgggcactcagcgcaaaaagagc
acgcacgctaaaaagcagattcagggtgccaacacggtgcagcgggccccccgtgccctc
ttctgcctccggctgaacaacccgatccgccgggccgccctctccatcgtcgagtggaag
ccctttgatgtattcatcctgcttgctatatttgccaattgtgtcgctctcggcgtgtcc
aagcctttccctgaggacgactccaacgctacgaatcatgacctggaacaagtggagtac
gtgtttctcatcatcttcacagtcgagaccttcctgaagatcctggcgtatggactggtc
atgcatcccagctcttacattcgcaatggatggaaccttctggactttgtcattgtcatt
gttgggctgttcagtgtagtcctggagacggtgacccacaagcccggggaggcccatcac
atggcagggaagccaggagggctcgatgtgaaggcactgcgggccttcagggttttgagg
cccttgaggctggtttcaggagtacccagcctgcagatcgtgttgaactccatcatgaag
gccatggtccctctgctgcatatcgccctactggtgctttttgtcatcatcatctatgcc
atcatcggcctggagcttttcatcggaaggatgcataagacctgttattacaccagcaca
gacttatttgtagaggacgatccagtgccctgtgcttttgctggacacggtcgccagtgt
atgatcaacggctctgagtgcaggggcaaatgggagggccccaacggaggcataactaat
ttcgacaacttcttcttcgccatgctgactgtctttcagtgcatcaccatggagggctgg
accgacgtgctctactggatgaatgacgctatagggtttgagttgccctgggtctacttt
gtcagcctggtcatttttggttctttcttcgtcctcaaccttgtgttgggtgtcttgagc
ggggagttctctaaggagagggagaaggcaaaggcacgtggggacttccagaagttgcgt
gaaaagcagcagatggaggaggacctgtgcggctacatggactggatcacgcaggcagag
gacatagatgaagaagatgaggacggcaacagacacgtcactctgggtgacctggctgac
aagaagaggggaaaatttggctggttcagtcattccagcgaaacacacgcaagcctcccc
gccagcgagacggcttctgagaccacagagaacattgaggaggagcacacggactgctgc
gcttcctgctgtgctaagatcatgaaaaaccgtctatgtcggacgctgcgccgttggaac
cgcgcatgtcgccggaactgtcgggtcgctgtgaagtccgttaccttctactggcttgtg
ctgctcctcgtgttcctcaacaccgtcaccagtgcctctgagcactacaaccagcctgac
tggctcacacaagtccaggacattgccaacaaagtgctcctgtcactgttcactgtggag
atgctgctgaagatgtatagtctggggcttcagggctactttgtggcattcttcaaccgc
ttcgactgctttgtggtatgtggcggcatcatggagactatcctggttgaaatggagatc
atgcctccgctgggtatctctgtgctacgttgcgtccgcctgctaaggatcttcaaagtc
acacgacactggaacgctctgtccaacctggtggcctctctcctcaactccatgaagtct
attgcctccctgttgctcctgcttttcctcttcctcatcatctttgccctgctgggtatg
cagctctttggtgggaagtttaactttgacgaggctcaaaccaagcggagcaccttcgac
gctttccctcaggccctgctcacatgcttccagatcctaaccggtgaggactggaatgta
gtaatgtatgatgggatcatggcatatggaggcccatacttccctgggatgatagtctgc
atatactttgtcattctcttcatctgtggtaactatatcctgctgaatgtcttcttggcc
atcgctgtggacaatctggctggtggagatggtgatgacaacaaaaaagaagaaaagaaa
gacggggaaggaacggagagtgaagaaacaaaggtcgatatggatgaatatgaagaagag
gaggaaccagaagagggtgaagaaggagaaggaagggtccagataaacgtggctgacttc
accccacccaaagagaaagttctcccaattcctgaagggagcgcctttttctgtctcagc
aaaaccaacccgataagagtgggctgtcacacactgatccatcaccacatcttcacgaac
ctcatcctggtcttcatcatcctcagcagtatttcgttggctgcagaagatccaatcagg
gcacactctttcaggaaccaagtcttgggctacgctgactatgcgtttacatccatattc
acagtggaaatcctcctgaagatgactgtacatggtgcgttcctacaccagggctctttc
tgcaggaactggttcaacctcctggacctgctggttgtcagcgtgtccctggtctccttc
ttcttgcactcaagcgccatctctgtagtgaagatcctcagggtactgcgagtgctcagg
cctctgcgagccattaacagagccaagggactcaagcatgtggtgcagtgtgtttttgtg
gccatcaggaccatcgggaacatcatgatcgttaccacactactgcagttcatgtttgct
tgcatcggagtgcagcttttcaagggcaaattttacagatgcaacgatgaagcaaagtac
actccggagcagtgcaagggcacctttgttgtgtataaggatggggatgtgacccagcca
atggttaaggacagagtgtggcacaacagtgacttcaacttcgataacgtgctgatgggc
atgatggctctcttcaccgtgtccaccttcgagggctggcccgcgcttttgtacaaggca
atcgatgccaatggtgagaataaaggtcccatctacaactaccgcgtggagatttctatt
ttcttcatcgtctacatcatcatcattgccttcttcatgatgaacatctttgtgggtttt
gtcatcatcaccttccgtgagcagggagagcaggagtacaagaactgtgagctggacaaa
aaccagagacagtgtgtagaatatgccttgaaggcccaaccactgaaactgtacatcccg
aagaaccctgtacaatacaggttctggtccattgtcaactctactgcctttgagtacatc
atgtttgtcctgatcctgctgaacactgtgaccctggcagtgcagcattatgaccagtcc
aaaacgttcaattacactatggatatactgaacatggtcttcactggcctcttcactgtg
gagatggtgctcaaaattcttgccctcaggcccaagcactacttcattgacgcctggaac
tcatttgatgctctaattgtggtgggcagcgtcgtggacatagtggtgacagagttcagt
agctctgaagacagctctcgagtctccattacatttttccgcctgttccgtgtcatgcga
ttagtcaaacttctcagcaagggagagggcattcgcacccttctttggacgtttgtcaag
tcacttcaggctctaccctatgttgctctgctcatcgctatgatcttctttatttatgct
gtcatcggcatgcagacttttgggaagattgccatgcaggatctcactcagatcaacagg
aacaacaacttccagaccttcccccaggccgtgctgctgctcttcaggtgtgcgacaggt
gaggcctggcaggagatcatgctggccagcctgccaggaaagcgctgcgacccggagtcc
gactacgaaccaggggaggagttcacctgcgggagtaacttcgccatcgtgtacttcatc
agcttcttcatgctctgtgcttttctgattatcaacctgtttgttgctgtcatcatggac
aattttgattacctgacacgcgactggtccatccttggccctcatcacctggatgagttc
aaacggatctggtctgagtacgaccccgaggcaaagggccgtatcaagcacctggatgtg
gtggctctcctgcgcagaatccagcctcctctgggttttggaaaattgtgccctcaccgc
gttgcctgcaagaggctggtagccatgaacatgccgctgaacagcgatggcacggtgacc
ttcaacgccactctgtttgctttggtcagaactgccctcaagattaaaacagaaggtaac
ccagaccaggagaatgaggagctgaggattatcatcaagaagatatggaagcgcatgaag
cccaaaattttggatgaggtcatcccccctgctgcggaggaggaagtgaccgtggggaag
ttctacgccaccttcctaatccaggactacttcagaaagttccgcaagcgaaaggagaag
ggcgtgctaggagacccggataccaacaattcatctgctctccaggcaggtctgcgtacc
ctgcaagacctggggccagagatgaggctggccatgtcctgcgacctcgaggaagaggag
gaagaggaaggcctggaggaagagccagaagaggatgaaacccattacaagagcaacggt
gtgttccccggtcatggtgatgctgtctccaaggacaggcgcggctccgtggcctcacct
gcttccagcactcccgggccactaggagaggccctttccaacggggtggctcaccggtcc
tctgtgatgggcttgtcaaaaacacccaatggaagcggggtgcaagaggaccccagggga
gcggaggacgacagggcaccctcacatcatcgccgtggttctcaccgtcggcactcgtct
gtcaggaatgggctcgtggaccagcctcccaaagccatctccaacaggcgagtgtgtcta
caaagccatggacatggtgcgaaatgggacgatgtagagcggaagcgcttttctcacact
gtcaattccagtgaaaatatgtttgtcatgtttcgttatggtaaagcctgcttttgtacc
atcctgtcaagcagcagagtgcggtactacaacaaatacctcaggagagactctggggat
gtttatgactctccaagtggaaggcatgatgggaggacggaggcaggagaggaacgttac
cctggagagcagggctactacaggagggaggaggatgccgagagtccggtcttgagggac
aggcatttgtatgcagacagcacgccgatgcaccccgggcaccacgaacacatgtacaat
gcacacccacctggacacgtgctgtacaacaatcactatggcaacggctatggcgagggt
cgacggacagctcggcgacgtctacttcctgccacgcccactggacgcaagcccgctttc
aacatccagtgtttgagacggcagggcagcagtgatgatctgcccatccctggcacctac
caccagaactcccctccctgccgcgcacgcacacagacgtacggcagctacgactcccgc
cgcagcagtacccgctcgtcaacaagctccacagcctcgtgggccaatccaggcccccgg
cgaagtcgcttgctctacgccccattaattctagtggaggaggagggtgcaggggctggg
ggcttggtgtggggggacaagaagtcgaatgaagccagccttcctgcttccgcccagcct
ggctggtacacgggctctgggaatggcggcgggccgcagccatatcgagcctacaccacc
ttgcgggtgcccacccagctgagccctcactatagtgacaagaggggcagcgcggacagc
cttgttgaggcggtcctgatctcagaggggctaggtctctatgccaaggatccaaaattc
gtggcctttgccaagcgggagattgcagatgcctgccacatgaccatcgatgagatggag
agtgccgccagtgatcttttgagccgtggcagcggaggagggggtggcgggggcttcctg
aaccaccctgacgtgggaaccttgtacagcgatgaggagcccatcaggagccgggatgaa
gaggagctggctgatgagatgacctgtgttacctccttctga
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integrated database retrieval system
