Scleropages formosus (Asian bonytongue): 108936376
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Entry
108936376 CDS
T04919
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04260
Cardiac muscle contraction
sfm04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108936376
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108936376
04261 Adrenergic signaling in cardiomyocytes
108936376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108936376
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108936376
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_2
dCache_1
Cache_3-Cache_2
DUF2201
Phage_int_SAM_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
108936376
NCBI-ProteinID:
XP_029104605
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Position
24:7087519..7199718
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AA seq
1087 aa
AA seq
DB search
MGTCRTPVAVLLLLLLSVLSRPSCGQFPTQVVIKEWVEQMQQELVTLVETASGVKSFTQI
FLNNRKLYSVETNYAGQLVASAARNIEKLLLKRSMALETLATAAERFQMEHQWKNEFGED
DIVYYNAKDNLDANETEGRKNRIRPEFKEDPSFRRLISYNHTAVHIPTDIYEGSTIVLNE
LNWTEALEDVFKKNREEDPTLLWQVFGSATGLARYYPASPWMDSRKMPSKIDLYDVRRRP
WYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVNEMLETLSDDDYVNVVYFNTGVSKAA
CFDHLVQANVRNKKILKDAVQNITAKGITNYKEGFKFAFEQLSYSNVTRANCNKIIMLFT
DGGEERAQEIFEKYNPDKKVRIFTFSVGQHNYDKGPIQWMACANKGYYYEIPSIGAIRIN
TQEYLDVLGRPMVLADKQAKQVQWTNVYLDALELGLVITGTLPVFNKTRTRDDKDGTQKK
HQNQLILGVMGIDVSLEDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPV
TLDFLDAELENDIKVQIRRLMIDGETGERTLDTLVKSQDERYIDRGVRTYTWAPVNGTDY
SLALVLPEYSKHYIQARIGDTITQAKWQKVSETLQQENFEEYGYTFIAPREYCKDLKLSE
NNTQFLMDFNEYIDRKTPNNPTCNVTLVNRLLLDAGLTSDLVSIWKEQSPKGVLARFVAT
DGGITRVYPKSAGEFWTENAETYESSFYKRSLDNDIYIFTAPFFNKSVDVFDSGILASRA
VELNIEGVKLKPAVVGVKLNVTAWMMSFMNATMKINCKDEICGCVKNDKHVDCVILDDGG
FLLMSNQDEYVAQTGRFFGEVDPILMINLVNTSLYSFNKTYDYQSVCNPERESKAAAGLR
SVYVPTVADILNIGWWATAAAWSILQQLFVSFTFPGFLEAADPEEELSEVLSKESCITEQ
TQYFFEGNEKSFSGVLDCGNCSRMYLAEKLLNTNLVFLITDAKGTCLSCDPKPLIQAEQL
STGPDPCKLAENPRYRKGPDVCFDNDVNEDDSDCGGASGLSASLWPMAGIQLVLFVWLAS
GPSPCPS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacctgtaggacccccgtggcggtgctgctgctgctgctgctgtcagtgctgagc
cggccgtcctgcggccagttccccacgcaagtcgtaattaaggagtgggtggaacagatg
cagcaggagctggtgacccttgtggaaacagcaagtggagtaaagagttttacccagatt
tttctgaataacaggaagctctacagtgtggaaacaaattatgctggccagctggtggca
agtgcagccaggaatatagagaagttgctactcaaaagatcgatggcgttggagacgctg
gcgactgcagcggagaggttccagatggagcaccagtggaagaacgagttcggggaagat
gacattgtttattacaatgcaaaagataatctcgacgcgaacgaaacggaggggcggaaa
aacaggataaggccggagttcaaggaggatccctcattcagacggctcatttcgtacaac
cacacggcggtccacattcccaccgacatctacgagggctctactattgtgctcaatgaa
ttgaactggacagaggccctagaggatgtgttcaagaagaacagggaagaggaccccact
ttgctgtggcaggtgtttggcagtgccacgggcctagcccgctactacccagcatcgccg
tggatggattcgaggaaaatgccaagtaaaatcgatttgtacgacgtccgccggcgaccg
tggtatatacagggagctgcttcgccgaaggatatgcttattcttgtggacgcgagtgga
agcgtctccggtctgaccctcaagctcatccggacctcggtcaacgaaatgttggagacc
ttgtctgacgacgactacgtgaacgtggtttatttcaacacgggcgtgagcaaggccgcc
tgcttcgaccacctggtgcaggccaacgtccgcaacaagaagatcctgaaggacgcggtc
caaaacatcacggccaagggcatcaccaactacaaagagggcttcaagttcgcctttgag
caactgtcctactcgaacgtgacccgtgccaactgcaacaagatcatcatgctcttcacg
gacgggggagaggagagggctcaggagatcttcgagaagtacaatccggacaagaaggtg
cgtattttcaccttttcagtcggtcagcacaactacgacaaggggcccatacagtggatg
gcctgtgccaacaaaggctactactatgagatcccatccatcggcgctatcaggatcaat
acacaggaatacctggatgtgctgggacggcccatggtgttagctgacaaacaggccaag
caggtccagtggaccaatgtgtacttggatgcgctggaactgggccttgttattacggga
accctgccagtgttcaacaagacccggacgagagacgataaagacggaacccagaaaaag
caccagaatcaactaatactgggggtgatgggtatcgacgtgtctcttgaggacatcaag
aggctgacgccgcgcttcacgatcggccccaacgggtactattttgcaatcgaccccaat
ggctatgttttacttcatcccaacctccaaccgaagaaccctaaattccaggagccggtg
acgctggattttctcgacgcggagctggagaacgacatcaaggtgcagattagaagactg
atgatcgacggggagacgggggagcgcaccctggacacgctggtgaagtcccaagatgag
aggtacattgacagaggggtccgaacgtacacctgggctccggttaacggcacagattac
agcttggcgctggtgctgcccgaatacagcaagcattacatccaggcgagaatcggagac
actatcacacaggccaaatggcaaaaggtttctgaaactctgcagcaggagaactttgag
gagtacggctacacattcatagccccaagggagtactgtaaggacttgaagctgtcggaa
aacaacacccagttccttatggacttcaatgagtacattgacagaaaaacacccaacaac
ccaacatgtaatgttactctggtcaacaggctgctccttgacgctggattaacttctgac
cttgtgtccatctggaaggaacagtcaccaaagggggtcctggccaggtttgtcgccacg
gatggaggaatcacacgtgtctatccaaagagcgctggggaattctggacagaaaatgca
gagacctacgaatcaagtttctacaagaggagcctggataacgacatttacatctttact
gcgccgtttttcaacaaaagcgtggacgtcttcgactcgggcattctggcgagcagggcc
gtggagctcaacatcgaaggcgtcaagctgaagccagccgtggtcggcgtgaagctcaac
gtcacggcctggatgatgagtttcatgaacgccaccatgaagataaattgtaaagatgag
atctgcggctgtgtgaaaaacgacaagcacgtcgactgcgtcattcttgacgacggagga
ttcctgctcatgtccaaccaagacgaatacgttgctcagaccggccgcttctttggtgag
gtggatcccatcctgatgattaacctggtgaacacctccttgtactctttcaacaagacc
tatgactaccagtccgtgtgcaacccagagcgggagagcaaagcggcagctggcctgcgc
tccgtctacgtgcccacagttgcagacatccttaacataggctggtgggccaccgcagca
gcttggtcaatattgcagcagttgtttgttagttttacgtttcccggtttcctggaagca
gcggacccggaggaggagctctccgaagtgctgtccaaggagagctgcatcacggagcag
acccagtacttctttgagggcaacgagaagtccttcagcggagtgctggactgtgggaac
tgttccaggatgtacctggccgaaaagctgctcaacaccaatctcgtgttcctcatcact
gatgccaaagggacctgcttatcgtgcgacccgaaaccgctgatacaagcagagcagctg
tccacgggtcccgacccctgcaagctggcagagaaccccaggtacagaaaagggcccgac
gtgtgtttcgacaatgacgtcaatgaggatgactctgactgcggcggggcgtccggcctg
agcgcgtcgctctggcccatggcgggtatccagctggtcctcttcgtgtggctcgcgagc
ggaccgagcccctgcccgtcgtga
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