Scleropages formosus (Asian bonytongue): 108937189
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Entry
108937189 CDS
T04919
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108937189
03036 Chromosome and associated proteins [BR:
sfm03036
]
108937189
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108937189
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108937189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
MARF1_RRM1
THOC7
Motif
Other DBs
NCBI-GeneID:
108937189
NCBI-ProteinID:
XP_029109883
LinkDB
All DBs
Position
8:26440557..26466225
Genome browser
AA seq
1688 aa
AA seq
DB search
MQRVSRDMRQEIDSLHIVLLYFSDTVEVTEEMEINVEQVPSATSSPLSDLGLTFLWCTTG
FPISTEDRVPHCTVPESAKARAGAPTPGDPPANSTPGSSSDGKRPPSGAPHPPRELPPRF
RHHEPKQLLRRGQPLPAGSPPPGSPQAFSTNQHAEPSHHIGLAAKYENLQGRAPSNSSSD
PVIVDRSDTEAWPCVSRSDDHTHTLCTTDSDCAAETSSGGSMSTATDTGQLGRYAAPHPT
NGGASQAQPCWGSATLNLNFNLNLNPNSNPSAWPVLGQEESGTREAGLGSRNAPPPGLCG
SSGAPATQGGSGGHSGNKASSCANFMGCGGSSAWGDPESRSSPPTTAAFSSEPQNLNADG
PNGTKRESSNPVCPLSEPNSFVPPPQSPLQVTGEDGSGDSAWDSAPTGWGSGGGGAGGAC
VWGQGNGGESGIGSLRDHADSWGHRVSAPASEGSSDSQESPSQRRERPPAEEASPKLLTQ
DLDPRVLCNTGWGQTPVRQHTAWDTEDTSGTQTWGSPSPATPTSTVPKPANVRRSDGAGH
SATTAPTWGSSGPPPNQLSSTWGESSGKKVANGPTEWGSVSDGPSTGAPAQSWTPEEKSP
SWDDHQAKPDNTSQSWSEGPTPTPSRGWGGAGGGGVKATGEEWARSEEGKNDGPARPHWE
DTPRGWGRNAQGHGGGWEDTPRASGPRQGWGGPSQEGASGSSGTGGGAASWGGAASVRQS
STDWGGELATGGNGGCGGAGGRQEPTGWEDPSPPSLRRRMEIDDGTSAWGDPNAYSKTVN
LWDKNAACAPTSGRPSAPGSRNGNKQPCHAPPRHSQPHGPCGNSGSLSDPSGPQQHGPPS
RTSLAPDGWGEAPGTHPKAEPSWGQGPCPPPTVDNGTSAWGKPLASCRGWGDGPEAPGPF
GRGTTAPGSAPCKSAPKSMQEGWVGGSEDPNPTGGPWEAEDGEGWSSTTSQESNSSCNSW
ANLPRQGPQKGKVMNKKDDSWIMNRLIKQLTDMGFPRDPAEEALRNSNMNLDQAMSALLE
RKTELDKRGVGGSDYNNGPVHKTAGCRPGAQSKEPASERPAFLDKMQSGMIGGGGASLGR
AIQQAPPPPQSVPPLNSSQPGLRAQVPQFLSPQVQAQLLQFAAKNTGLNPALLSSPINPQ
HMTLLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPIRQQEQQVARTINNMQQQIQQQQRQL
AQALLMKQQLHAPSHPGTGKSTLDSFPGHHQASGLTDLQTKEQQPSPSTYIPYPLSGLNS
NVNVSSMEAGNLSAKDPPQPQSRLAQWTHPSPMESLSPLETGLSKHGRKLSHAQGQPPMD
DAYSPYNLLPSTDLPSGSLVSPESWGQTQGPGDKLSNGTNISWPPEFCPGVPWKGLQNID
PETDPNVTPGSVPSGPTINTTIQDVNRYLLRDRSGGKLSDKPTWPPGSTPHGQAPLSHEL
WKAPQGPRNTPAPSRPPPGLTNTKPSSAWGGGALSLAPGWGSSSYAAGTTWSSDSSVRGS
SWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLSLTQGSAVVRYSSKEEAAKAQKSLHMCV
LGNTTILAEFAGEEEVNRFFAQGQSLTPPATSWQASQGNNQARPGLAGAGPGLTGAGPAH
AASQWNGSQAKASAGGGNGSGNELLWGGAPTHYSSLWGAPGGEDAGLIGSPTPMNTLLPG
DLLSGESM
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagggtatcgagagatatgaggcaggagattgacagtttgcatattgtgttactg
tacttttcagacaccgttgaagttacggaggaaatggaaataaatgtggagcaggtgccc
agtgccacgtcatcgccattgtctgacttaggcctcacattcctttggtgcaccacaggt
ttcccaatttccacagaagaccgggttccccattgcactgtgcccgagtcagccaaggcc
agggctggcgctccaacccctggcgaccccccggcgaactccacgcccggcagtagcagc
gatggcaagcgccccccctccggcgcaccccacccgccccgtgagctgcccccgcgcttc
cgccaccacgagcccaagcagctgttgaggaggggccagccgctgcctgccgggagtccg
ccccccggctccccccaggctttctccaccaatcagcacgcagagccttcccaccacatt
ggtctggcagccaagtatgagaacctgcaaggaagagctccatccaacagcagctcggac
ccggtaattgtggacaggagcgacactgaggcgtggccctgtgtgtctcgcagcgacgac
cacacccacacactatgtactacagattctgattgtgccgcggagacaagcagcggtggc
agcatgagcacggctacagacacgggccagctgggccgttatgcagcccctcacccaacc
aatggtggagccagccaggcccagccctgctggggttctgccaccttaaacctgaacttt
aatttgaacttgaacccaaactccaatccttctgcgtggccagtgttgggacaggaggag
tcgggcaccagggaggccggtttggggagtagaaatgctccacctcctggactgtgcggt
tcgtcaggagctccggccactcagggtggcagcggcggtcacagtggtaacaaggccagc
tcctgtgctaacttcatggggtgtggaggcagcagtgcctggggcgacccggagtcgcgg
tcctccccgcccacgaccgcggccttcagcagcgagccgcagaaccttaatgccgatggt
ccgaatggcactaagcgagagtcatcgaacccagtctgccctctttctgagcctaactct
tttgtaccgcctccgcagagtcccctgcaggtcactggagaggatggctcaggggactcc
gcctgggactcggcaccgacgggctggggtagcggaggaggcggagcaggaggcgcgtgt
gtctgggggcaggggaacggaggggagtcgggaatcggctctctgcgggatcacgccgat
tcctggggtcacagagtcagtgcccctgccagtgagggcagcagcgacagccaagagagc
ccttcgcagcgcagggagaggcctcccgcagaggaagccagcccaaagctgctaacccag
gacctggaccctcgcgtgctgtgtaacacgggctggggccagacgccagtccgccagcac
acggcatgggacacagaagacacttcaggaacacaaacgtggggatccccatctccggcc
actccgacatccaccgttccaaaaccagcaaatgtgaggagaagtgacggagcaggtcac
agtgccactacagctccaacctgggggagttcaggcccaccccccaaccagctgagctcc
acatggggagagtcatctggtaagaaagtagctaatgggcccacggagtggggcagcgtc
tcagatggtccaagcactggagcccctgcacagtcctggacccctgaggagaagtctccc
agctgggatgaccatcaggccaaaccagacaacacctcccagagttggagtgaggggccc
actcccacaccatctcgtggctgggggggcgcaggtggtggtggggtcaaagcaaccgga
gaggaatgggctcgttccgaggaaggaaagaacgacggccctgcccgtccccactgggag
gacactcctcggggctgggggcgaaacgctcaagggcacggaggaggctgggaggacacg
ccgcgagccagcggccccaggcagggttggggaggtccgtcgcaggaaggcgccagcggc
agcagcggaacaggaggaggtgctgcttcctggggtggtgctgcctctgtgaggcagagc
agcacagactggggaggagaactggcaacgggaggaaatggaggttgcggcggggctggg
gggcgacaggagcccaccgggtgggaagacccctctcccccttccctccgccgcaggatg
gagatcgacgacggcacctcggcttggggcgacccgaacgcttacagcaagaccgtcaac
ctgtgggacaagaatgctgcctgtgcacccaccagcggccgcccctccgctcctggcagc
aggaacggcaacaagcagccctgccacgcgcccccacgccacagccagccccacgggcct
tgcgggaacagcggcagcctgtcggacccgtcgggacctcagcagcatggaccacccagc
aggacgtccctggcgcccgatggttggggagaggcgccaggaacacaccccaaagccgag
ccctcgtggggacaagggccatgcccgcccccaactgtggacaatgggacatcggcgtgg
ggcaaacccctggccagctgcaggggctggggggatggcccagaggcccctggaccattt
ggcaggggtaccacagccccaggaagtgccccctgcaagtcagctcccaaatctatgcaa
gaaggctgggtgggcggcagcgaggacccaaacccgaccggggggccatgggaggctgag
gatggggaaggatggagcagcaccacatcccaggagagcaattcctcctgcaattcctgg
gctaacctgcccagacagggaccacagaagggaaaagtaatgaacaaaaaggatgattcc
tggatcatgaatcgtctgatcaagcagctaacagacatgggcttcccgagagatccagca
gaggaagcactgaggaacagcaacatgaatctggatcaagcaatgagcgccctgctggaa
agaaagacagagctggacaagcggggtgtgggtggttcagactataacaatggacccgtt
cacaagacagcgggctgccggcctggagcgcagtccaaagaacccgcctccgaacgacct
gccttcctggacaagatgcaaagcggcatgattggcggtggtggcgcatcgctaggtcga
gccatacagcaggctcctccccctccgcaatcagtcccacctctcaactcctcccagcca
ggtcttcgcgctcaagtgcctcagttcctttcccctcaggttcaagcacagctcttacag
tttgcagcaaaaaacactggcctgaatcctgcacttttatcctctccaattaaccctcaa
cacatgaccctgctgaaccagctgtaccagctgcaactggcgtaccagcgtttacaaatc
cagcagcagatgttgcaagcccagcgcaatgtttctggccccatcaggcagcaggaacag
caagttgcacgcacaatcaacaacatgcagcagcagatccagcagcagcagcgccaactg
gcccaggcccttctgatgaagcagcagctgcatgctccctcccaccccggcaccggcaag
tcgaccctggacagcttcccgggccaccatcaggcctcgggcctcaccgacctgcaaacc
aaagagcaacagccctctccctccacctacatcccttaccctctttccggactgaactca
aatgtgaatgtgagcagcatggaggctggcaacctgtctgcgaaggaccccccccagcca
cagtcgcgcctagcccagtggacgcatcccagccccatggagagcctctcgccgctggag
acaggtctcagcaagcacggccgcaagctttcccatgcacaagggcagccgccgatggat
gacgcctacagcccctacaacctgctccccagcaccgatttgccctccgggtcgctggtg
agccccgagagctggggtcagacccaaggccctggtgacaagctctccaacgggactaac
atcagctggcctccagagttctgccccggagtaccctggaaagggctgcagaatatcgac
ccagagacagaccccaacgtgacccccggcagcgtgcccagcggtcccactatcaacacc
accatccaggacgtgaaccgctacctgctgagggatcgcagcggaggtaaactttcagac
aagcccacctggccccctgggtccacaccccacggccaggccccgctatctcatgagctg
tggaaggcacctcagggccccaggaacacgccggccccatcgcgcccccccccaggctta
accaacaccaagccctcttcggcctggggtggcggagcactcagcttggcgccaggttgg
ggaagctcctcctatgctgcaggaaccacgtggagttcagatagctcagtcaggggcagc
agttggctggtgctgaggaacctaaccccccagatcgatggctcgacccttcggacgctg
tgcctgcagcacgggcccctcatcaccttccacctcagcctgacgcagggcagcgccgtc
gtccgctacagttccaaggaggaagccgccaaagcgcagaagtcgttgcacatgtgcgtt
ttgggaaataccaccatcctggctgagtttgctggcgaggaggaggtcaatcgattcttt
gcacagggccagtccctcacaccacccgccaccagttggcaggccagccagggcaacaat
caggcaaggccgggattggcaggggcggggccagggctgacgggggcggggcctgcgcat
gctgcgagccagtggaacggcagccaggccaaggccagcgctggtggcggcaatggctct
ggcaacgaactgctgtggggtggggctcccacacactactccagcctgtggggagccccc
ggcggagaggatgccgggctcatcggaagccccaccccgatgaacacgctgctgcctgga
gacctgctgagcggagagtccatgtag
DBGET
integrated database retrieval system
