Scleropages formosus (Asian bonytongue): 108941540
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Entry
108941540 CDS
T04919
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108941540 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108941540 (exosc5)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108941540 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108941540
NCBI-ProteinID:
XP_018619808
UniProt:
A0A8C9V9S4
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All DBs
Position
10:7829297..7835292
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AA seq
226 aa
AA seq
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MHNARNAMEVESSSTCALREFGCEQSLLSRPDGSSSFIQGDTSVLAGVYGPADVKVSKEI
HDRATLEVLIQPKVGMSGVRERAQEQCVRETCEAALLSSLHPRSSLSLVLQIIHDDGSLL
SCCLNAACMALMDAGLPMGCLFCGVTCAIDRDGRIVTDPTMQQEKESRALMTFAIDSTER
KVLMSTTKGSFSVNELQQCIAVSQRASEKIFQFYRDSVRRRYSKTL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcgagaaacgcgatggaggttgaaagctcgtcaacgtgcgcactgagggaa
ttcggctgcgagcaaagtctgttgtccaggccggatggctcgtcgtcctttattcaaggg
gacaccagtgttctggcaggagtgtatggacctgctgatgtgaaggtcagtaaggagatc
catgatcgcgctacgttggaggtcctcatccagcccaaagtgggcatgtcgggtgtgcgg
gaacgagcacaggagcagtgtgtgagggagacctgcgaggcagctcttctgtcctcgctg
caccctcgctcgtccttgtcccttgtcctccaaatcattcatgatgacggctcgctgctg
tcctgctgcctaaacgctgcctgcatggccctgatggatgcagggctacccatgggctgc
ctcttctgtggtgtgacctgcgccattgaccgtgatgggagaattgtgactgaccctaca
atgcagcaggagaaggaaagtcgggctttgatgacctttgccattgacagcacagagcgc
aaggtgttgatgtcaacaacaaaagggtctttttcagttaatgagctgcagcagtgtata
gcagtcagccagcgggcatcagagaaaatcttccagttctacagagactctgtcagaaga
cggtattccaagacactctga
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