Scleropages formosus (Asian bonytongue): 108942586
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Entry
108942586 CDS
T04919
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfm00536
]
108942586
Glycosaminoglycan binding proteins [BR:
sfm00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108942586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRR_1
LRRNT
LRR_9
LRRCT
hEGF
EGF_3
DL-JAG_EGF-like
Laminin_G_3
C8A_B_C6_EGF-like
Motif
Other DBs
NCBI-GeneID:
108942586
NCBI-ProteinID:
XP_018621533
LinkDB
All DBs
Position
8:complement(10530656..10651887)
Genome browser
AA seq
1536 aa
AA seq
DB search
MPGTRGSDYSARGTPVGLSRAALWTLLLVILLGSHTCACPTLCTCSGTTVDCHGLGIKTV
PRNIPRNVERLELNGNNLTRINKNDFSGLKHIRVLQLMENQIGNIERGAFDDMKELERLR
LNRNQLHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHIGCIEDG
AFRAMRSLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLSQWLRQRPI
IGLFTQCSAPLHLRGLNVAEVQKHEFTCSGHIEPSSPQPCSLAAGSCPAMCTCSNNIVDC
RGKGLTAIPANLPDNMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIAPNAFQG
LRSLNSLVLYGNKITELPKGVFDGLYALQLLLLNANKIHCIRANAFQDLQNLSLLSLYDN
KIQSLSKGTFSALRAIQTLHLAQNPFVCDCNLKWLADYLRSNPIETSGARCTSPRRLANK
RIGQIKSKKFRCSSKEQYFIPGTEDARLNTDCSSEPVCPPKCRCESNVVDCSSLRLTKIP
EHIPASTAELRLNNNEITTLEATGVFKTLTQLKKINLSNNKISEVEDGAFEGASSVTELH
LTANQLDSVRSSMFRGLSGLRMLMLRNNRISCIHNNSFTGLYNVRLLSLYDNQLTTIAPG
AFDTLQTLSTLNLLANSFICDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVAVP
DFRCEEGQEEASCVPRPQCPSECTCLETVVRCSNKHLRALPKGIPRNVTELYLDGNHFST
VPKELSTFRYLQLVDLSNNKISSLTNTSFANMSQLTTLILSYNSLRCIPALAFGGLKSLR
LLSLHGNDISELPDGIFRDVASLSHLAIGANPLYCDCHLRWLSDWVKTGYKEPGIARCIG
PPAMEGKLLLTTPAQKFECHGGVDPAIQAKCSPCLSNPCQNQGTCQSDPVDIYKCTCPTG
YKGKNCEKVLNACVSNPCANGATCQPSNEDSDVFSCFCPPGFDGPTCHTNIDECQDNNCE
NGASCVDGLNNYTCLCGPFYTGKMCEEPVDMCAPLLNPCHPHSTCVIANKGSKCVCPPGY
VGNDCSVNYNDCGEHRCQNRAQCVDRVNGYTCACVDGYSGPLCEIPPALRSPCDLADCQN
NAPCVERGGRGFCQCPPGFGGPRCEKLVSVNFVDRDSYVLLSDMKNWPEANITLQVSTAE
DNGILLYNGDSDHIAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMV
NLSIDGGLPTTMDSFGKVQPLNGDAPLYVGGMPVDVHSAGFRFWQIHNGSSFHGCIQNLY
INNELQDFTKTQMKPGVVPGCELCRKLYCLHGICQPNSGTGPICHCHPGWSGPHCDLPTN
NPCQGSKCVHGKCLPLDMQSYRCECQEGYRGALCNQQEQLFNPCKRLQCKHGQCQISGTG
EPYCHCESGYSGDMCDTGSECQGVPVRDFYQVQRGYVICQTTRMVSWVECSGSCSIGTCC
GSQRMKRRKYSFECSDGSSFSEEVEKTIKCGCVGCM
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggacacgaggcagcgactatagtgccaggggtacccctgtggggctgtccaga
gctgccctgtggactctgctgttggtcatcctgcttggtagccatacctgtgcctgtccc
acactttgcacctgcagtggcaccacagtggactgccatgggctgggcatcaagactgtg
ccccggaacatcccgaggaatgtcgagaggctggaactgaatggaaataacctcactcgc
atcaacaagaatgacttctctgggctgaagcacatcagagtccttcagttgatggaaaac
cagatcggcaacatcgaacgaggagcatttgatgatatgaaggagctggagaggcttcgc
ctgaatcgcaaccagcttcaccagcttcctgagctgttgttccagaagaatgctgctctt
tcaaggctagacctcagtgagaacttcattcaagccatccccaggaaggcatttcgtgga
gcaacagatatcaaaaaccttcagctggacaagaaccacatcggctgtattgaggatggg
gcattccgtgcaatgagaagcctggaagtgctgaccctgaacaacaacaacatcagcagc
attccagtctccagctttaaccacatgcctaagctccgaaccttccgactccactccaat
aacctcaactgtgactgtcacctggcttggctgtcacagtggctgcgtcagaggcccatc
attggcctttttacccagtgcagtgccccactccatctccgaggcctcaatgtagctgag
gtacagaagcacgagttcacctgttcaggccacatagaaccgagcagcccccagccctgc
agccttgcagccggctcctgtccagctatgtgcacatgcagcaacaacattgttgattgc
aggggcaagggactgactgctattcctgccaatttgcctgacaacatggctgagatacgc
ctagaacaaaatgggattaagtctgtccctcccggtgctttctctccctacaagaagctt
cgtagaatagacctcagcaataaccagatatctgagattgccccaaatgcttttcaaggc
ctgcgttccctcaactctcttgtgctgtatggaaataagattaccgagctgcccaaaggt
gtgtttgatggactgtacgccttgcagctgctactgttgaatgctaacaagatccactgt
atccgtgccaatgccttccaagacctgcagaacctctctctgctctctctatatgacaac
aagatccagagcttgtctaaggggaccttctctgctctgcgtgccatccagaccttgcac
ttggcccagaaccccttcgtctgtgactgtaacctgaagtggctggcagattacctgcgc
tcaaaccccatcgagacaagtggtgcacgctgcacaagcccccggcgccttgccaacaag
cgtattggccagatcaagagcaaaaagttccgctgctccagcaaagagcagtatttcata
ccaggcacagaagatgctcgtctcaatactgactgcagcagtgaacccgtttgccccccc
aaatgtcgctgtgagtccaatgtggtagactgctctagcctccggctcactaagatacct
gaacacatccctgcgtccactgctgagctgcgcctcaacaacaatgagatcacaactctg
gaggccactggtgtcttcaagaccttgacccagctcaagaaaataaacctcagcaacaac
aaaatttctgaggttgaggatggggcatttgagggggcctcctctgtaactgagctgcat
ctgacagccaaccagttggactctgttcgcagtagcatgttccgtggattgtctgggctg
cgcatgctaatgctccgaaacaaccgcatcagctgcattcacaacaacagcttcacagga
ctgtacaatgttcgcttgctgtccctctatgacaaccaactgaccaccattgcacctgga
gcctttgatactttgcagaccctctccactctgaacctgttagccaattctttcatctgt
gactgtcgactggcttggctgggtgattggcttcgcagccgcaagattgtgacaggaaac
ccccggtgccagcgacctgccttcctgaaggagatcccactgcaggatgtggcagtgcca
gacttccgctgtgaggagggccaagaggaggccagttgtgttccacgtccacagtgccct
agtgagtgcacctgtttggagacagtggtgcgttgcagtaacaagcacttgcgagccctg
cccaagggcattccccgcaacgtcactgagctgtacctggatggtaatcatttcagtacg
gtgccaaaggagctgtccactttccgatatcttcagcttgtagacctgagcaacaacaaa
atcagttccctgaccaacacttcctttgctaacatgagccagctcaccacattgatcctc
agctacaactcccttcgatgtatccccgccctagcatttggaggactaaaatccttgagg
ctgctgtctctacatggcaatgacatttctgagctgcctgatgggatcttcagggatgtt
gcctctctctcgcacttggccattggggcaaacccactgtactgcgactgtcatctgcgc
tggttgtctgactgggtgaagaccggctacaaggaacccggcatcgcacgctgcattggg
cctccagcaatggagggcaaactgctgttgacgacacctgcccaaaagtttgagtgccat
ggtggtgttgaccctgccattcaggccaagtgcagcccttgtttgtctaacccctgccag
aatcaaggcacctgtcagagtgacccagtggacatctacaagtgtacctgtcccacaggg
tacaagggcaagaactgtgagaaggtactcaatgcctgtgtttctaatccttgtgccaat
ggcgccacttgccagccaagcaatgaggacagtgatgtctttagttgcttttgtcccccg
ggctttgatggccccacctgccataccaacatagacgaatgccaggacaacaactgtgag
aatggcgctagttgtgtggatggcttgaacaactacacatgcctgtgtggccctttctac
actggaaagatgtgtgaggagcctgtggacatgtgtgctccactactgaacccttgccat
ccccattccacctgtgtcatcgccaacaaaggctctaagtgcgtgtgcccccctggctat
gtgggcaatgactgcagtgtgaactacaatgactgtggggagcaccgctgccaaaacagg
gcccagtgtgtagacagagtcaatggctacacttgtgcttgtgttgatggttacagcggg
cccctgtgtgagatccctcctgcacttcgctctccatgtgacctggctgactgccaaaac
aatgcaccctgtgtggagaggggggggaggggcttttgccaatgtccacccgggttcggt
gggccgcgctgcgagaagttagtcagtgtcaactttgtagacagggactcctacgtgctt
cttagtgatatgaagaactggcctgaagctaacatcacacttcaggtatccactgcagag
gacaatggcatccttctttacaatggtgacagtgatcatattgcagtcgaactgtaccaa
ggtcatgtgaaggtcagctatgaccctgggagccagcctggacatgccatctacagcacc
gagaccatcaatgatggtcaattccacactgtggagctggtgacctttgaccagatggta
aacttgtctattgacggtgggctcccaaccacaatggacagttttgggaaggtccagccc
ctgaacggagatgctccgctttatgtgggggggatgcctgtggatgtccactcagctggg
ttccgcttctggcagattcacaatggctccagctttcacggctgtatccagaacttgtac
atcaacaacgagctgcaggacttcaccaagacacagatgaaaccaggcgtggtgcccggg
tgtgagctgtgccgcaagctttattgcctacatggcatatgccagcccaacagtggaaca
ggtcccatctgccactgccaccccggctggagtgggcctcattgtgacctgcccacaaac
aacccctgccagggcagcaagtgtgttcatgggaagtgtctgcccctggacatgcagtcc
taccgctgtgagtgtcaggaggggtatcgaggggccctttgtaaccagcaggagcagctg
ttcaacccctgcaaaaggctgcagtgtaaacatggccagtgtcagatctcgggcacagga
gagccctactgtcactgtgagagtggctacagtggtgacatgtgtgacacagggtcagag
tgtcaaggggtgccagtgagggacttctaccaagtgcaacgtggctacgtgatatgccag
accacacgtatggtgtcatgggtggaatgcagtggatcttgcagcattggaacctgctgt
ggcagccagcggatgaagcgtaggaaatacagctttgagtgcagtgatgggagttccttc
agtgaggaggtggagaagaccatcaagtgtggctgtgtgggttgcatgtag
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integrated database retrieval system