Shewanella frigidimarina: Sfri_1473
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Entry
Sfri_1473 CDS
T00395
Name
(GenBank) transcriptional regulator, LysR family protein
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_1473
03036 Chromosome and associated proteins [BR:
sfr03036
]
Sfri_1473
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sfri_1473
Chromosome and associated proteins [BR:
sfr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Sfri_1473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ABI71325
UniProt:
Q084J0
LinkDB
All DBs
Position
1761925..1762818
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AA seq
297 aa
AA seq
DB search
MSKLDYKLLQALSCVIKEQSFERAAGVLCLSQSAVSQRIKQLEQQFAQPVLIRSQPIQTT
DLGKQLLKHYYQVVQLEADVLPSAMPHSPQTPLTLNIATNADTLATWLIPAIAPVIKSHL
VEINLLIEGEARTINRLKDGQAFGAISVQSTPIKGCQLTRLGCVDYLLVASPEFSRDYFP
NGISADSLRKAPGIAFDHKDNMHTRYIQQHFGLMQGEYPLHAVRSSDAFVTMAKHGAAYC
LVPKTQIKPELATGELVHICKDHIITETLYWHHWILLKGVYKDVSDAIIAHAQSVLD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacttgattataaattgctgcaagcattgagttgtgtgattaaagaacaaagt
tttgagcgtgcagcaggtgtgttgtgcttatcgcaatcggcggtgtcacagcggattaaa
caattagagcaacagtttgctcaaccagtattgattagaagccaacctattcaaactaca
gatttaggtaagcagctcttaaagcactattaccaagtggtacagctagaagctgacgta
cttcctagtgctatgcctcattcgccccagactccgttaactctgaatatcgccaccaat
gccgacacgttggcaacttggctcattccggcaatagccccagtgattaagtcacattta
gttgagataaatctgctgattgaaggtgaagctcgtacgattaataggttaaaggatggc
caagcttttggtgccatttcggtgcaatctacaccgattaaaggttgtcaattaactcga
ttaggctgtgtcgactatctgctagtggcgtcacctgagtttagtcgtgattatttccct
aacggcattagtgctgacagccttagaaaagcaccgggtattgcgtttgatcataaagac
aatatgcacacacgttatattcaacagcattttggtttgatgcaaggtgaatatccatta
catgctgtgcgttcatcagatgcttttgtgaccatggctaaacatggtgctgcctattgt
ttagtaccaaaaacgcaaattaaaccagaactagccactggtgagttagtgcacatatgt
aaagaccatatcatcactgaaacgctttactggcaccattggattttacttaaaggtgtc
tataaagacgtttcagatgccattattgcccacgctcaatcggtattagattaa
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