Shewanella frigidimarina: Sfri_3345
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Entry
Sfri_3345 CDS
T00395
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00470
D-Amino acid metabolism
sfr01100
Metabolic pathways
sfr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sfri_3345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sfri_3345
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Sfri_3345
Enzymes [BR:
sfr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Sfri_3345
Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Precursor biosynthesis
Racemase
Sfri_3345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Tudor_RapA
Motif
Other DBs
NCBI-ProteinID:
ABI73181
UniProt:
Q07XT3
LinkDB
All DBs
Position
complement(3992551..3993669)
Genome browser
AA seq
372 aa
AA seq
DB search
MKPFPRAEISRYALQSNLAQLRLIAPNSKIMAVVKANGYGHGLLNVAECVGLLNYVESVC
KYHGGADGFGLARLEEALQLREGGVKGKLLLLEGFFRQSDLPTLVSHNIDTVVHHESQLQ
MLETIALDKPVTVWIKIDTGMHRIGFSLEQFNSIYQRLLACPQVAKPIHLMTHFACADEP
DNPLTQTQMNAFEQQVSGLEGDRTLANSAGTLFWPTSQADWVRPGIALYGVSPVVGDRGV
NHRLIPAMELVSNLIAVREHKAGDSVGYGASWTAKKDTRLGVVAIGYGDGYPRNAPEGTP
VWINGRRVPIVGRVSMDMLTVDLGADAQDNVGDSVQLWGKALAVEEVAEHIGTIAYELVT
KLTPRVVVELLD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccttttcctcgtgcagaaatcagtcgttacgcattgcaaagtaacttggcacaa
ctgcgccttattgcgcccaatagtaaaattatggcagtggttaaagccaatggttatggc
catggattattaaatgttgctgaatgtgttggcttattaaattatgtagaaagcgtctgc
aagtatcatggcggcgcagatggttttggattagcaaggcttgaagaagcgttgcaactc
agagaaggcggtgtaaaaggtaagcttttattattagaaggtttcttccgtcagtctgat
ttacccacactggttagccacaatattgatactgtggttcatcatgaatcgcaattgcaa
atgcttgaaactatcgcgctagataagcctgtcaccgtatggataaaaattgatactggt
atgcatcgtattggctttagtcttgaacaattcaacagtatttatcagcgcttgctggct
tgtccgcaagtggctaaaccgattcatttaatgacccactttgcatgcgccgacgaaccc
gataatcctctcactcaaacgcaaatgaatgcctttgagcaacaggttagcggcttagaa
ggcgatcgcaccttagcaaattctgcaggtaccttattttggccaacaagccaagccgac
tgggtaagacccggcattgcgctttatggtgtatctccagttgtgggtgatcgaggcgtt
aatcatcgattaattccagcgatggagttagtctccaatttaatcgcggtgcgcgagcat
aaagccggtgatagtgtcggttatggtgcatcttggaccgctaaaaaagacactcgttta
ggggttgttgccattggttatggtgatggttacccacgtaatgcgccagaaggtacaccg
gtgtggattaacggccgcagagtaccgatagtcggtcgagtgtctatggacatgttaacc
gtagatttaggtgctgatgcacaagataacgtcggcgatagcgttcaactgtggggcaaa
gcacttgcagtagaagaagtggccgagcacattggcaccatagcttatgagttagtcact
aagcttacgccgcgcgtggtagttgaattgctcgattga
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