Shewanella frigidimarina: Sfri_3521
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Entry
Sfri_3521 CDS
T00395
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_3521
Transporters [BR:
sfr02000
]
Other transporters
Pores ion channels [TC:
1
]
Sfri_3521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
Adhesin_P1_N
HIP1_clath_bdg
HTH_34
EI24
Motif
Other DBs
NCBI-ProteinID:
ABI73349
UniProt:
Q07XB5
LinkDB
All DBs
Position
4192069..4193712
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AA seq
547 aa
AA seq
DB search
MLRILLTLLLFTSAVFTTLSLRAEQDAVIPIVATSQLTDTQNQISRLQQTIEQDTKLLFK
AKGELRTFTEYRIKNKSSELRDKIGQLIATPDADQQYLVTLVQSQLAFLENVSAYLDAQI
MTMRLDLSLDDDSQKILAISQREFERDHYLKAQLTTLQWAETLNIDVSVQKQKLTEFMLN
RADQFDSLVHYTQDELQKAVAEAADAGADITSEQKADVVALKERLEQSSSSLAVSAGILE
TLGQNVAPFKQTLFSVSGDITQDVLNFSVASNLLQGWGKVIKDQTINNGPSLTFKILVFL
FILFAASLVAKIVTQIISKTVRASKLQFSQLLQDFFISLSSKIVFALGLLIALSQLGFEL
GPLLAGFGIAGVIIGFALQDTLSNFASGMMILIYRPFDVGDLINAANVTGRVSHMSLVST
TIKTLDNQRLIVPNNKIWGDTINNITAEHQRRVDMTFGISYSDNVEHAETILKSIVEQHP
KVQAHPEPIVKLHTLGESSVDFIVRPWVKPDDYWEVYWDITRAVKIRFDAEGISIPFPQR
DVHIYQK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgctacggattttactaacgttattattattcacatcggcagtgtttacgacactatct
cttcgtgcagaacaagatgctgtgataccgattgttgccactagtcagctaactgatact
caaaatcaaatcagccgtttacaacaaacaatcgagcaagataccaagctactatttaag
gcaaaaggtgaactgcgtacatttactgaatatcgcattaaaaacaagtcgtctgaatta
cgcgacaaaattggtcaacttattgccacaccagacgcagaccagcaatatctagtcacc
ttagtacaaagccaattggcctttttagagaatgtcagtgcgtacttagacgcccaaatt
atgaccatgcgtcttgatttaagtctagatgatgacagtcaaaaaatcctagccatttca
caacgagaatttgaacgcgaccattatctcaaggcacaattaaccactctgcagtgggca
gaaacactgaatatagatgtgagtgtccaaaagcaaaaattgaccgagtttatgctcaat
agagcggatcagtttgatagtttagtgcattacacacaagatgaattacaaaaagccgtt
gcagaagccgctgatgcaggtgcagatatcaccagcgaacaaaaagctgatgtggtggca
ctaaaagaacgcttggagcaaagcagctctagcttagcggtttcagcgggaatactcgaa
acattaggccagaacgtggcaccatttaaacaaacattgtttagtgtttctggtgatatc
acccaagatgtattgaattttagcgtcgcgtctaacctgctacaaggttggggtaaagtc
attaaagatcagacgattaataatggacccagtttaacctttaagattttagtgtttcta
ttcatattatttgcggcaagtttagtcgccaaaattgttacacaaattatctctaaaaca
gtacgtgcatcgaaattacaatttagccaactgttgcaagacttctttatctcgttgtcg
agtaaaatagtgtttgccctaggattattgattgccttatcacagctcgggtttgagctt
gggccgttactcgcgggttttggtattgcgggagtcattattggttttgcactgcaagat
accctgtctaacttcgcttctggcatgatgatcttaatctatcgtccatttgatgtcggc
gacttaatcaatgccgctaatgttaccggtcgcgtcagccatatgagcctagtatcaaca
acaatcaaaacgctagataaccaacgtcttattgttccaaacaataaaatctggggcgat
accattaacaacatcaccgcagagcatcagcgtcgagtagacatgacttttggcattagc
tacagcgacaatgttgaacatgcagaaaccatattaaaaagtattgtagaacaacaccct
aaggtgcaagcgcatccagaaccgatagtgaaactccacacattgggcgaatcgtcagtc
gactttattgtaaggccttgggttaaacccgatgattactgggaagtatactgggacatt
actcgcgcagtgaaaatacgctttgatgcggaaggcattagtattccgttcccgcaacgc
gatgtacacatatatcaaaagtaa
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