Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4986
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Entry
SFyv_4986 CDS
T03315
Name
(GenBank) Glycogen debranching enzyme
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00500
Starch and sucrose metabolism
sfs01100
Metabolic pathways
Module
sfs_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SFyv_4986
Enzymes [BR:
sfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
SFyv_4986
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Motif
Pfam:
GlgX_C
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AIL42704
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Position
complement(3566197..3568170)
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AA seq
657 aa
AA seq
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MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGNSGDIWHGY
LPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYR
DNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALG
HPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETA
LDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWT
GCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNC
PVLSQVKLIAEPWDIAPSGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAA
SSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKE
GLGGTLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLNWLDW
SQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQ
ILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITVVWQGPAHGLCVFQR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacacaactcgccattggcaaacccgctcccctcggcgcgcattacgacggtcagggc
gtcaacttcacacttttctccgctcatgccgagcgggtagaactgtgtgtctttgacgcc
aatggccaggaacatcgctatgacttgccagggaacagtggcgacatttggcacggttat
ctgccggatgcgcgcccgggtttgcgttatggttatcgcgttcatggcccctggcaaccc
gccgaggggcatcgctttaacccggcgaagttgttgattgatccttgcgcgcggcaaatt
gacggggagtttaaagataacccgctgctgcacgccggtcataatgaacctgactatcgc
gacaacgccgccattgcgccgaaatgcgtagtggtggttgatcactatgactgggaagat
gacgccccgccgcgcacgccgtggggcagcaccatcatttatgaagcccatgtcaaagga
ttaacgtacttgcacccggagatcccggtcgagatccgtggcacttataaagccctcggg
catccggtgatgatcaactatttgaaacaattgggcattaccgcgctggaactgctgcca
gtggcgcagtttgccagtgaaccacgtctgcaacgcatggggctaagtaactactggggt
tacaacccggtggcgatgtttgcgctgcatccggcgtatgcctgctcgccagaaacggcg
ctggatgagtttcgcgatgcaatcaaagcactgcataaagcgggtatcgaagtcattctt
gatatcgtgctcaaccatagtgcggaactggacctcgacggcccgttattctcgctgcgt
gggatcgataaccgtagctattattggataagagaagacggcgattatcacaactggacc
ggttgcggcaacacgctcaatttgagtcatccggcggtggtggattatgccagcgcctgc
ctgcgttattgggtagaaacctgccacgtcgatggtttccgctttgatctggcggcagtc
atgggccgtacgccagagttccgtcaggatgcgccgttgtttaccgctatccagaactgc
ccggtgctctcgcaggtgaagttaattgctgaaccgtgggatatcgctcctagtggttat
caggtgggaaatttcccgccgctgtttgccgagtggaacgatcatttccgcgatgctgcc
cgtcgtttctggctacattatgatttgcctctgggggcgtttgccgggcgttttgctgcc
tccagcgatgtttttaaacgtaatggtcgtctgccgagtgccgcgattaatctcgtcacc
gcgcatgacggttttacgcttcgcgactgcgtttgcttcaaccataaacacaatgaagca
aacggagaagaaaatcgcgacgggaccaacaacaattacagtaacaatcatggtaaagaa
gggttaggcggtactcttgacctggttgaacggcggcgcgacagcattcatgccctgtta
acaacgttgttgctctcccagggcacgccgatgttactggccggtgacgaacatggtcac
agccagcatggcaataacaatgcctactgtcaggataaccaattaaactggttggactgg
tcgcaggcaagcagtggtttaaccgcatttaccgccgcgttaatccatctgcgcaagcgc
attcccgctttggtggagaatcgctggtgggaagaaggtgacggcaatgtccgttggcta
aatcgatatgctcaacctttaagcacggatgagtggcaaaacgggccgaaacagctgcaa
attctgctctcggatcgctttttgatcgcaattaacgccacgcttgaggtaacagagatt
gttttacctgctggggagtggcacgccattcccccattcgctggagaggataacccagtg
attacggttgtctggcagggacctgcacacggattgtgtgtgttccagagatga
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