Syntrophobacter fumaroxidans: Sfum_0479
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Entry
Sfum_0479 CDS
T00418
Name
(GenBank) ATP-dependent nuclease subunit B-like
Organism
sfu
Syntrophobacter fumaroxidans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABK16179
UniProt:
A0LFH7
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All DBs
Position
573770..576496
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AA seq
908 aa
AA seq
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MTNLEYQEKLLDLITDGHTVLSETERFANQLRLRARGRYRRQGAPGWDGVAVGTFNAWAM
DCWEDSWPNEWPASDFTRWRLIREILRHNPPPEPLLPDLPLVVAVDESFAGCLRYGIDPG
EGDPANRLVEWRRGVWKEYRDALRALLLFHPASLPERLGSFLSLNPDAVPSKTVIAGFEF
AGYWEKKLFSRLADTHGALALPLPQVKAKPRAVVYADREQEVFGLLGDLIRGAGEGRLHE
LAVVLLDRGTYAPILSQHLKDLLGAQLEGENAAYNLLAGDVLTSQSLWRAALLPLDFCLG
GESGTQLFSLLRSPYYGYFGARGRALAQWDRVWREQGIEKGLTALLGSLGGREDVLPRRG
AELTEGLGALTDRGTRAASEWSAGLRSFWKQMEFPVIANERDRIAWQRLTGLLDGFDAEL
GDSSMRAAEFAAWLTAAGEKAPVQPSGFEDAGIQVIGELELRGLAFKRLFVPGFLSGVIP
QPARSLPFLSVRERRLVLGGTAESQFEFAAHLFGQVQAAARETVVSRPLLGEGGEPCLPS
PFWPASEETMAPVIPWRHDLPVMQRARWVRDGIEGIAAAMERKEPAGKTHAGGESAPDLY
RAERLRFPSEVSVSELELLLACAGRFFLRVILGLEALPVPTRGLDAAVRGRKIHALLAGF
GRRLRGIPGGHEREPEALCRLLDEMVRKDIEEQARVAHWRVELARLLGGAEGAPGLLKEW
LALECSRFGEGWRWTAFEPSFDNLKLRDCPVGIKGRLDRLDLHSELGCICWDYKTGAAPG
MKEVLEDFKAPQLPVYLLAVRKGLVPAIGDRRVTLAAGYIALQSVRKLNHCLVIGADERM
ESFLSQWESVLAEKIDAARRGQLAPLWVLQPCEERCDYECLCGELLFAGPEAASGCAAPG
NPVERGRG
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatctcgagtatcaagagaagcttctggacctgataaccgacgggcacacggtg
ctttcggaaacggagcggtttgccaatcagttgagactgcgtgcccgcgggcggtatcgc
agacaaggcgcgcctggctgggatggggttgcggtcgggacgttcaacgcgtgggcaatg
gactgctgggaggactcatggccgaacgaatggcccgcatcggatttcacgagatggcgg
ctgatccgggaaatcctgcggcacaatccccccccggaaccgcttcttcctgacctcccg
cttgtcgtcgccgtcgacgagagctttgcgggctgtctgcgttacggcatcgacccggga
gagggagatcccgccaaccgcctggtggaatggcggcgcggcgtgtggaaggaataccgt
gacgcactccgcgccttgctgctcttccatcccgcgtcgcttcccgaacgtttgggttcg
ttcctgtccctgaaccccgacgcggttccgtcgaagacggtgatagcgggattcgagttt
gccgggtactgggagaagaagcttttctcccggttggccgacacgcatggtgccctcgca
ctgccgcttccacaggtgaaggcgaaaccgcgcgccgtcgtctacgcggatcgggaacag
gaagtcttcgggctgctcggcgacctgattcgtggagccggggaaggccgtctccatgag
cttgccgtggtgcttctcgatcgcgggacgtatgcacccatcctgtcacaacatttgaag
gatcttctcggagcccagctcgaaggcgagaatgccgcctacaacctgttggccggcgac
gtgctgacctcccagtcactctggagggcggcgcttctgcccctggatttctgcctgggc
ggcgaatccgggacgcagctgttcagcctgttgcgttcaccgtattacggttattttgga
gcccgcggcagggcgctcgcgcagtgggaccgggtctggcgggagcagggaatcgagaag
gggctgacggccctgctgggttccctgggcgggcgggaagatgtcctgccgcggcggggt
gcggagctgaccgaaggactcggcgctctcacggatcgtggcacgcgtgccgcatccgag
tggagcgcaggccttcgatcgttctggaagcaaatggaatttccggtcatcgccaatgag
cgcgatcggatcgcctggcagcggctgaccggcctgctcgacggcttcgatgccgaattg
ggcgattcttcgatgcgtgccgcggagtttgcggcatggctcactgcggcgggagaaaag
gctccggttcaaccttcgggtttcgaggacgcgggcattcaggtaatcggcgagttggaa
ctgcggggactggccttcaaaaggctgtttgtgcccggctttctttccggcgtcattccg
cagccggccaggtccctgccgtttctgagcgtgcgggagcgcaggcttgttctcggcggt
acggcggaaagccagttcgagttcgcggcacatctcttcggtcaggttcaggcggcggct
cgggaaaccgtggtgagtcgcccgttgctcggcgaggggggcgaaccttgcctgccctct
ccgttctggccggcgtccgaagagacgatggcccccgtgatcccgtggcgccatgacctg
cccgtgatgcagagggcaagatgggtgagggacggcattgaagggatcgccgcggccatg
gagcgcaaggagccggccggcaaaacgcatgccgggggcgaatcggctcccgacctttac
cgggccgagcgtctccggtttccgtccgaggtctccgtcagcgaactggagctcttgctg
gcctgtgccgggcggttctttctgcgggtcatactgggactcgaagcgcttcccgtccca
acgcgcggtcttgacgcggcggtccgtggccggaaaatccacgcgctcctggccggcttc
ggcagaagactccgagggattccgggcggccacgagcgggagcccgaagcattgtgccgg
ctgctcgacgagatggttcgcaaggatattgaagaacaggctcgggttgcgcactggcga
gtggaactcgcgaggctgctgggcggagcggaaggcgcgccgggcttgctcaaggaatgg
ctcgcgctcgagtgttccaggtttggggaggggtggcgttggacggcgttcgaaccgagc
ttcgacaacttgaaactccgcgattgcccggtggggatcaaagggcggctcgacaggctg
gatcttcattccgagctcggttgcatatgctgggactacaagaccggcgccgcgccgggc
atgaaggaagtgctcgaagacttcaaagccccgcaacttccggtctacctgctggccgtt
cgcaagggcctggtccccgcgatcggagaccgccgggtgacgttggccgccgggtacatc
gctcttcagtccgtccgcaaattgaatcattgccttgtgatcggagccgatgagcggatg
gaatccttcctgtcgcagtgggaatcggtccttgcggagaagatcgacgctgcaaggcgc
ggccaattggcgccattgtgggttttgcagccgtgcgaggagcgctgcgactatgaatgt
ctctgcggagagctgctttttgcggggcctgaagccgcgagcggttgcgcagcgccgggc
aacccggtcgagcgcggccgggggtaa
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